Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04282 ATGGAGACTTTATGCAACAAGGATGAAAATTTTCAAAAGAAAAAAAATGGGTCTTGTAGTTCTACTGGTTCATGTTCTTCAGATTTGACTGAACAAGAAAAAAGAGTTAAAGGGTGTTCATCATCTCTTCCTATTCGGAAGACTATTGTCTCCAAATGCAGCAAATCAGATGAAAAAGAAAATGAACATGTTTCTCAAGTTGAACATAAAAAAGTACATACTAGTATCAGTTCAAAAATTTCTGGATCAGGAGTTGATATGATGAAGGAGAGGTTTGCAAAGTTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGAGTTAGCACTGCTATGGCTATCTCAAATGCTATTACTAATTTGTGTGGGACTGTATTTGGGCAATTATGGAGACTAGAACCTGTACCTTGTGAAAAGAAAGAAAAGTGGCAAACAGAAATGGATTGGCTTCTTTGTGTTGGTGATCATATTGTTGAGTTAATGCCTTCTTGGCAAACATTTCCAGATGGTAGTAAGCTAGAGGTAATGACTTGCAGACCAAGATCAGATATTTTTATCAATCTTCCAGCTCTGCGTAAACTCGACAACATGCTTCTTGAAATATTAGATAGTTGTACAGCTATGGAGTTTTGGTATGTTGACCAAGGAATTGTGGCACCAGATGCAGATGGATCAGTCTCTTTTCGGAAAAGAAATCAGCGGCAAGAGGAGAAATGGTGGCTCCCTGTACCTCGTGTTCCCCCTGCTGGTCTCAGCGAGAGTTCAAGAAAGAAGTTGACTCACGCACGCGAATGCGCTAGCCAAATACTTAAAGCAGCCATGTCTATCAACAGCATTGCCTTAGATGATATGGAAGTTCCAGAGTCCTATTTGGAATCCCTTCCTAAGAATGGAAGAACTTGCTTGGGGGATTTTATCTATCGATACATCACATCGGACCAATTTTCTCAGGAATGCTTGCTTGACTGCATAGATATTTCCAATGATCACGTTGCACTAGAGATCGCTAATCGTTTGGAAGCCGCGATATATGTATGGCGCCGAAGATCTCACTCTAGACCTCCACTTTATCCTGTCCGTTCGACTACTAAGTCATCATGGGAGATTGTGAAGGACTTCATGGTTGATGGAGATAAGAGAGATTTGCTTGCAGAGAGAGCTGAAAGTATTCTACTTTCACTTAAGCAGCGTTTCCCGGGTTTAAGTCAAACTACATTGGATACTAGCAAGATCCAGTACAACAAGGATGTTGGAAAATCAATACTAGAAAGCTATTCAAGAGTTTTGGAGAGTATGGCATTTAACATAGTAGCTCGTATCGATGATTTACTATATGTTGATGACATAACAAAACATTCAGATAGGTTTCCATTAGCTCCAATGGTTTCACAAAAGAAAGTTTCACAACAATCAAAACAAGTGTCTGTCTCAGACACTCAACACAACAAAACAACACTTGGTGGCACACCAAGTTGTTCACCTGTTGTGCCACTAATTAGTCCTTCAAAGGTTGAGATAACTCCTTTTATTCGCGATATGATTAAACCTCAACGCCGCGGTTTTGGTGTGAAGAGAGCGTTGTCGAATTATCTTGGAGGTGAAATGAAAGCAGCAAAGGTATTTAGCAACTTAGCTCATGAGGTGAATGGTTCAAATACTATTTGCAATAAAATAGAACAAGGAAGTCAGAATGAATCATGTGCCTTGAAGAGCAAGACAAAATGA 1725 0.3948 METLCNKDENFQKKKNGSCSSTGSCSSDLTEQEKRVKGCSSSLPIRKTIVSKCSKSDEKENEHVSQVEHKKVHTSISSKISGSGVDMMKERFAKLLLGEDMSGSGKGVSTAMAISNAITNLCGTVFGQLWRLEPVPCEKKEKWQTEMDWLLCVGDHIVELMPSWQTFPDGSKLEVMTCRPRSDIFINLPALRKLDNMLLEILDSCTAMEFWYVDQGIVAPDADGSVSFRKRNQRQEEKWWLPVPRVPPAGLSESSRKKLTHARECASQILKAAMSINSIALDDMEVPESYLESLPKNGRTCLGDFIYRYITSDQFSQECLLDCIDISNDHVALEIANRLEAAIYVWRRRSHSRPPLYPVRSTTKSSWEIVKDFMVDGDKRDLLAERAESILLSLKQRFPGLSQTTLDTSKIQYNKDVGKSILESYSRVLESMAFNIVARIDDLLYVDDITKHSDRFPLAPMVSQKKVSQQSKQVSVSDTQHNKTTLGGTPSCSPVVPLISPSKVEITPFIRDMIKPQRRGFGVKRALSNYLGGEMKAAKVFSNLAHEVNGSNTICNKIEQGSQNESCALKSKTK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04282 574 ProSiteProfiles PRONE domain profile. 75 457 IPR005512 GO:0005085
Trre9g04282 574 MobiDBLite consensus disorder prediction 15 29 - -
Trre9g04282 574 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 18 507 IPR038937 GO:0005085
Trre9g04282 574 Gene3D PRONE domain, subdomain 1 318 456 - -
Trre9g04282 574 Gene3D PRONE domain, subdomain 1 77 317 - -
Trre9g04282 574 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 85 451 IPR005512 GO:0005085
Trre9g04282 574 MobiDBLite consensus disorder prediction 467 490 - -
Trre9g04282 574 MobiDBLite consensus disorder prediction 1 30 - -
Trre9g04282 574 FunFam Rop guanine nucleotide exchange factor 14 317 456 - -
Trre9g04282 574 FunFam Rop guanine nucleotide exchange factor 1 76 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04282 Trre-Chr9 50667861 50670923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04282 - - gmx:100814278 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01985 5 14730098 14733027 Trre9g04282 9 50667861 50670923 ECH
Trre9g04282 9 50667861 50670923 Trre9g04282 9 50667861 50670923 ECH
Trre5g01985 5 14730098 14733027 Trre9g04282 9 50667861 50670923 PCT