Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01985 ATGGATACTTTATCACAAAATTCTCCAAAAAAAATTGATGGGTCTCTTTCTAGTTTCACTGATTCAAGTGCTGAGTCTAGAACAACTAGTTTTAGTGGATCTAATTCTAGCTTATCAATTTCTACTTCAGAAGAAGCTAAACCAAATGGGTTTTCTTCTAATACTCCTCTTGGTTGGCCTATTCTTAAAGCTACACTTTCCAATTCAAAGCGTTCAAATTCTGATGACAAAGAAAATAAGCACAAATCTAATTTGGAACACTCAAAATTTACTACCATAGATTTAAAAATCTCAGATGTTGATATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATTTCTAATGCCATTACTAATCTATGTGCTACTGCATTTGGGCAACTATGGAGACTAGAACCACTACCATGTGAGAAGAAAGAAATGTGGCGGAGAGAAATGGAATGGCTGCTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCCGATGGAAAGAAACTCGAGGTAATGACTTGCAGGCCTAGGACAGATATTTGTATCAACCTTCCAGCGCTTCGCAAACTTGATAACATGTTACTTGAAATATTGGACAGTTTCACGGCTACCGAATTTTGGTATGTTGATCAAGGAATTGTAGCTGCTGATTCAGATGGTTCGGCCTCTTTTCGCAAGTCGATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCCGTACCCCGTGTTCCCCCTACAGGTCTCAGTGAGAACTCAAGAAAGAATTTGAATCACTCAAGAGAAAGTGCTAGCCAAATTCTCAAAGCAGCTATGTCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAATCATATTTGGAAACACTCCCTAAGAATGGAAGAACTTGCCTAGGAGATTTTATTTACCGATACATCACATCCGATCAATTCTCCTCAGAGTGCCTGCTTGATTGCTTAGACCTATCTTCTGAACATACTGCACTCGAGATTGCAAACCGTGTAGAAGCTGCAATTTATGTATGGCGTCGAAGATCTCACCACAAATCATCACCTAGTCCCAACCGTTCAACTACAAAGTCATCATGGGGGATGGTCAAGGATTTCATGCTTGATGGAGATAAGAGAGAACTTCTAGCTAATAGAGCTGAAAACATTCTAAATTCATTGAAGCATCGGTTCCCGGGATTAACACAAACTACATTGGATACCTGCAAGATCCAATGCAACAAGGACGTTGGAAAATCTATTCTCGAAAGCTACTCTAGAGTTTTGGAGAGCATGGCTTTCAACATTGTGTCACGCATCGATGATTTGTCATACGTTGATGACTTGACAAAACATTCAGATAAATTTGCATTGGTTCCTCATACAACAGTTTCTCAGCAGAAAATTTCGCGTCCATTTTCAGTGTCCGTCTCAGGCACTCCACACAAAGCAGCATTTGGCACACCTAAGTTTTCGCCTGTGCCATTGATTAGTCCTGCAAGAGGAGAAAGAACTCCTTTCATCCACAACAATAATAACAACAACAATGTCAACATAAAACCTCAGCGTCGCGGCTTTGGGGTGAGAAGAGCGTTATCGAATTATCTTGGCGGTGAGACTAAAACAAAGACATGTCCAAATTCAACTGAGGTTAATTATTCAAACCCTAGTAGCAAGAAAACAGAACAATCAGAACAACAACATCAGAAGGAAACATGTGCTGTGAAAAACAAGACAAAATAA 1788 0.3993 MDTLSQNSPKKIDGSLSSFTDSSAESRTTSFSGSNSSLSISTSEEAKPNGFSSNTPLGWPILKATLSNSKRSNSDDKENKHKSNLEHSKFTTIDLKISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWRREMEWLLSVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAADSDGSASFRKSIQRQEEKWWLPVPRVPPTGLSENSRKNLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHTALEIANRVEAAIYVWRRRSHHKSSPSPNRSTTKSSWGMVKDFMLDGDKRELLANRAENILNSLKHRFPGLTQTTLDTCKIQCNKDVGKSILESYSRVLESMAFNIVSRIDDLSYVDDLTKHSDKFALVPHTTVSQQKISRPFSVSVSGTPHKAAFGTPKFSPVPLISPARGERTPFIHNNNNNNNVNIKPQRRGFGVRRALSNYLGGETKTKTCPNSTEVNYSNPSSKKTEQSEQQHQKETCAVKNKTK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01985 595 FunFam Rop guanine nucleotide exchange factor 7 300 428 - -
Trre5g01985 595 MobiDBLite consensus disorder prediction 553 577 - -
Trre5g01985 595 MobiDBLite consensus disorder prediction 1 54 - -
Trre5g01985 595 Gene3D PRONE domain, subdomain 1 332 472 - -
Trre5g01985 595 Gene3D PRONE domain, subdomain 1 93 331 - -
Trre5g01985 595 ProSiteProfiles PRONE domain profile. 90 472 IPR005512 GO:0005085
Trre5g01985 595 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 98 466 IPR005512 GO:0005085
Trre5g01985 595 FunFam Rop guanine nucleotide exchange factor 14 332 471 - -
Trre5g01985 595 MobiDBLite consensus disorder prediction 578 595 - -
Trre5g01985 595 MobiDBLite consensus disorder prediction 553 595 - -
Trre5g01985 595 FunFam Rop guanine nucleotide exchange factor 1 91 331 - -
Trre5g01985 595 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 26 524 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01985 Trre-Chr5 14730098 14733027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01985 - - gmx:100796692 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01985 5 14730098 14733027 Trre5g01985 5 14730098 14733027 ECH
Trre5g01985 5 14730098 14733027 Trre9g04282 9 50667861 50670923 ECH
Trre5g01985 5 14730098 14733027 Trre9g04282 9 50667861 50670923 PCT