Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03884 ATGACTATAATAGAGAAAGAGGAACACAACATAAAACTAGTAACTGACTTATACAAAGCCTTAGTATCCAAAGACACAAACACAATGCTACAACTTCTTGCATCTGATTTAGAATGGTGGTTCCATGGTCCTCCATGCCATCGTCACTATTTAGTCTCATTACTCACAGGCTCATCATCATCATCATCATCATCATCTCAAAAATCATTAGTTCCTAATCTCATAATTGGATTTGGATCAATTATTGTTGCTGAAGGGTATGATGAAAAAAATATGGTATGGTGGGTACATGCATGGTCTATTTCTAATGGAATAATCACTGAGGTTAGAGAGTATGTTAACACTTCGGTTACTGTTACTAAACTTGGTTTTCATTCAGAAGATGTTGTTGTTGGTTCCACTTTTAGGTCTATTTGGCAGAGTAAGCTTTGTGATGATTCTGTTCCTGGACTCATTCTTGCAATCTAG 468 0.3611 MTIIEKEEHNIKLVTDLYKALVSKDTNTMLQLLASDLEWWFHGPPCHRHYLVSLLTGSSSSSSSSSQKSLVPNLIIGFGSIIVAEGYDEKNMVWWVHAWSISNGIITEVREYVNTSVTVTKLGFHSEDVVVGSTFRSIWQSKLCDDSVPGLILAI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03884 155 SUPERFAMILY NTF2-like 8 123 IPR032710 -
Trre9g03884 155 Gene3D - 2 126 - -
Trre9g03884 155 PANTHER OS07G0691300 PROTEIN 5 155 IPR009798 -
Trre9g03884 155 Pfam Wound-induced protein WI12 53 155 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03884 Trre-Chr9 46986140 46986607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03884 - - var:108336652 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03884 9 46986140 46986607 Trre9g03884 9 46986140 46986607 ECH
Trre9g03884 9 46986140 46986607 Trre5g02155 5 16169195 16170244 ECH