Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02155 ATGAGATGGAAAAAGGGTAATAGTAGGGATCTGAGTTTGGTGCTGTACAAAAAGCACGCGAGAAACACTTTTCTCGAACTGGCTAACTCAAGCAGTGAATTAGACACTGATTCCAGCAATCAAAAGCTGGTTCTCAAACTATATGAAGCCTTAAACTCTCGAGATTCTGATACCGTGGTTAAGATTCTTGCATCTGATCTTGAGTGGTGGTTTCACGGTCCACCTTCTCATCAGTTTTTGATGCGTGTGCTTACCGGCGATTCTACCGCCGTTGATACTTTCCGTTTTGTTCCACAGTCACTTGTTTCGTTTGGATCCATTGTTATTGTTGAAGGTTGTGATAATTCTCGCAAAATCTCTTGGGTTCACGCTTTGACTGTTGTGGATGGGATAGTTACTCAAGTTAGGGAGTATTTCAACACTTCCCTTACCGTCACACGCTTTGCCGGGAAAGAATCCGGTGAGATTGTGCCGGCGGTCACTGATTCCGGTCGTTTCCCTTGTGTTTGGGAAAGTAGCGTTTCCAATCGGGTCGGGAAATCTGTACCCGGTTTGGTCCTCGCGATATAA 570 0.4509 MRWKKGNSRDLSLVLYKKHARNTFLELANSSSELDTDSSNQKLVLKLYEALNSRDSDTVVKILASDLEWWFHGPPSHQFLMRVLTGDSTAVDTFRFVPQSLVSFGSIVIVEGCDNSRKISWVHALTVVDGIVTQVREYFNTSLTVTRFAGKESGEIVPAVTDSGRFPCVWESSVSNRVGKSVPGLVLAI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02155 189 SUPERFAMILY NTF2-like 38 145 IPR032710 -
Trre5g02155 189 Gene3D - 25 158 - -
Trre5g02155 189 Pfam Wound-induced protein WI12 81 189 IPR009798 -
Trre5g02155 189 PANTHER OS07G0691300 PROTEIN 28 189 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02155 Trre-Chr5 16169195 16170244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02155 - - lja:Lj0g3v0040339.1 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03884 9 46986140 46986607 Trre5g02155 5 16169195 16170244 ECH
Trre5g02155 5 16169195 16170244 Trre5g02155 5 16169195 16170244 ECH