Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03508 ATGTTGCAAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCTAGCCACATTAGAACAAAGCAATCAAAATGGTTGGATCAATGCCTCCAAGATATGGAGGAGAAGGTGACCGATACATTAAGAATCTTACAAAATGATGGAGACTCATTTTCACAAAGAGCAGAAATGTATTACAGAAAAAGGCCAGAACTTGTTGAATTTGTCGAAGAAGCTTTTCGAGCATATAGAGCCTTAGCAGAAAGATATGATCATTTATCAAGAGAACTTCAAAGTGCAAATAGAACAATTGCAAGTGTCTTCCCTGATCAAGTTCCATGCCAAATCGATGATGACGAAGACGACGAAAGTGACACAGGAACAGTCCCACCATCTCCTGACCTCAATAGCCAATTTCAGAATTCACCAAGCATTCCAAAAGTTCCAAAGATTCCAAAGAAAGATTTTCGAAGTCCTTCGATGTTGTTATCGCGAAAAGGTCCAATTAAGAGAACTCCTTCTGTTTCACCAAACTATATGCCTACTCAAAAATCAGGTCTTACCAAAGCTGAAGCATTAGGTGAAATCGACAAACTTCAGAAAGAGATTTTAGCGTTGCAGACCGAGAAAGAGTTCGTGAGAAGCGTGTACGAGCGTGCATACGAAAAGTACTGGGAAATCGAAGATCATATTACAGGTATGCAGAAAAATGTTTGCAATTTGCAAGATGAATTCGGTGTCGGTACTGTCATTGAAGACGACGATGCTAGAGCCTTAATGGCAGCAACAGCATTGAAATCGTGTCAAGAGACGCTTTCAAAGCTTCAAAAGATTCAAGCACAATCATCGATAGAAGCTAAAGTTGAATATGAAAGGGTTAGAAAAGCTCATGAGATGTTTGAGAGTCTTAGAGATCAATTTATCAGTAAATTCATGAATCAAGAAGAACATGAACATGTCGAAAAATGTAAGAGCATAATAAGTGAAGAACAGAAACACATTGATGAAGAGATAGCTAGTTTGGAAGAACAAGAGAACGACGTTGTTTTGTTGAGAGAAACGATTAAAGAAAAATTGGAACAAGATTCTGCAAACTCTCTTACTGTGACTGAAATGGCCGAATGTATCGATGAGCTAGTGAACAAAGTTGTTACATTGGAAACCGCGGTGTCTTCTCAAACTGGTATGGTTAATCGATTGAGATCAGAAACCGATGAACTTCAAACAAATATAAAGAAATTGGAAGAGGACAAGGAAATTCTTAAAGCAGGAGCAGAAGTTACTAATATGAAACTAAAAGAATTTGAAGAGGAATTGTTAAGAGTGAAAATTCTTAACAAAAGTGTTAAATCGCAAGATAATAGCCTTCGAACACATTTTACCGAAGCTAGTTGTAATATCGAGCATTTATCCGGAAAGTTGAATAATATGAAACACGACGTGGATGATGTGAATTTAGTACTTTACAAGAAGAAGAAAAGTATTTCTGATGTTGACGATTCTATTATGAACGACATTAATACAATAGACGAAAGTGGTGGCGAAAATTTGGATGCTAAGAACTCTATTATGAGTCAAAATACAAATTTTATTACTGAAAGAATTGAAAAAATGGGACAACATGAGAAAGATGATTTGTCTGATACAGTTAGCAATCTTGAAATTGAATCACATGATTTAGAGACAGGTGAGGGTGATCAGCCTAATTGGAGGCAGATGTTTTTGACTGGATTAGATGATAGAGAGAAAATTCTATTGGAAGAGTATACATCTGTTTTGAGAAACTATAAAGATGTTAGAGTGAAGCTTAATGATGTTGAAAAGAAAAATAGAGACAGCATTTTTGAGTTGGCACTTGAGTTAAGGGAAATGAAGAATGCTCTTGTGACAAAGGACAAAGAGATACAATTTTTAAATCAAAAGATAAACTGTCCAGACACAAATCCAGATGAAAGTCCATACACAACAGCAACAGAATACAAATACACACCAAATGAAACACTTTTGAGAAAATCATCAGGTCAAGGATCCAACATGCAGGAGACAGATATTTCATCTCTAAACATAGAAACAACACCTTTTGAAGACCAAAATGATCAAAATTCATCAACCATTGGCCTCAAAATGACCCTTGGGAAGCTCATGGCAGACCAAGACAAGGTGGTCCACCTTTCCGATTTAGAAAAGAAATTCCGTTCGGACATCGACGACTTACTCGAGGAAAATCTTGAGTTTTGGCTAAGATTTAGTACCTCAGTTCATCAAATTCAAAAGTTTCAAAACTCAATTCAAGACTTAAAAGCAGAACTGAAAACAATAAAGGAAAACAACAAATCCGAAGGACATTCGCATTCGAAACATCATCAATCTACACAATCTCAACTTAGGCCGATTTTTCGACATTTAAGAGAGATTAGAACTGAATTATCACTTTGGCTTGAACACAATGCAGTGTTGCAAGATGAACTACAAGGTAGATATTCATCATTATGTAACATTCAAGATGAAATTGCAAGAGCAGGTAATAATGCACAACCTAATGCTGAAAAAAATGCTGAGATAATAAGTGGTTATCAAGCTGCAAAGTTTCAAGGTGAGATTCTTAACATGAAACAAGAAAATAGTAAAGTTGCAAGTGAATTACAAGCTGGTCTTAGTCTTGTGAAAGGTATGAAAATTGATGTTGAGAAAACACTTGATGAACTTGATCAAGATATTGGAATTAGTAGTGTTCATAGTGACAGAACAAAAAAGAACACATCAAAAGGTACTAGAATACCTTTGAGATCTTTCTTGTTTGGTGTTAAATTAAAGAGACAAAGGCATCAATCATCATCATCATTGTTTGCTTGTGTCAATCCTGCACTGACTAAACAATATAGTATCAATGAACAAGCACCAGCTCCAATAGAGAGAGAGGATATTTGA 2907 0.3605 MLQRAASNAYSWWWASHIRTKQSKWLDQCLQDMEEKVTDTLRILQNDGDSFSQRAEMYYRKRPELVEFVEEAFRAYRALAERYDHLSRELQSANRTIASVFPDQVPCQIDDDEDDESDTGTVPPSPDLNSQFQNSPSIPKVPKIPKKDFRSPSMLLSRKGPIKRTPSVSPNYMPTQKSGLTKAEALGEIDKLQKEILALQTEKEFVRSVYERAYEKYWEIEDHITGMQKNVCNLQDEFGVGTVIEDDDARALMAATALKSCQETLSKLQKIQAQSSIEAKVEYERVRKAHEMFESLRDQFISKFMNQEEHEHVEKCKSIISEEQKHIDEEIASLEEQENDVVLLRETIKEKLEQDSANSLTVTEMAECIDELVNKVVTLETAVSSQTGMVNRLRSETDELQTNIKKLEEDKEILKAGAEVTNMKLKEFEEELLRVKILNKSVKSQDNSLRTHFTEASCNIEHLSGKLNNMKHDVDDVNLVLYKKKKSISDVDDSIMNDINTIDESGGENLDAKNSIMSQNTNFITERIEKMGQHEKDDLSDTVSNLEIESHDLETGEGDQPNWRQMFLTGLDDREKILLEEYTSVLRNYKDVRVKLNDVEKKNRDSIFELALELREMKNALVTKDKEIQFLNQKINCPDTNPDESPYTTATEYKYTPNETLLRKSSGQGSNMQETDISSLNIETTPFEDQNDQNSSTIGLKMTLGKLMADQDKVVHLSDLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIKENNKSEGHSHSKHHQSTQSQLRPIFRHLREIRTELSLWLEHNAVLQDELQGRYSSLCNIQDEIARAGNNAQPNAEKNAEIISGYQAAKFQGEILNMKQENSKVASELQAGLSLVKGMKIDVEKTLDELDQDIGISSVHSDRTKKNTSKGTRIPLRSFLFGVKLKRQRHQSSSSLFACVNPALTKQYSINEQAPAPIEREDI 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03508 968 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Trre9g03508 968 MobiDBLite consensus disorder prediction 101 175 - -
Trre9g03508 968 Coils Coil 390 417 - -
Trre9g03508 968 Coils Coil 749 769 - -
Trre9g03508 968 Coils Coil 614 634 - -
Trre9g03508 968 Coils Coil 425 445 - -
Trre9g03508 968 MobiDBLite consensus disorder prediction 122 138 - -
Trre9g03508 968 Coils Coil 182 209 - -
Trre9g03508 968 Coils Coil 320 354 - -
Trre9g03508 968 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Trre9g03508 968 Coils Coil 69 96 - -
Trre9g03508 968 PANTHER PROTEIN NETWORKED 2D 1 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03508 Trre-Chr9 43864272 43869056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03508 - - gmx:100784970 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03508 9 43864272 43869056 Trre9g03508 9 43864272 43869056 ECH
Trre9g03508 9 43864272 43869056 Trre5g04580 5 47665521 47669309 PCT