Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03139 ATGGAGGATGAGGAAACTAATGAGGCAAGTCATCGAGCTGTTGGGAAACTAGAAGGAGATGCTTTTATTGTTCAGAATGAGGATTTGGGAAAACAATCAGAGGGGGAGAAAATGCGAAATATTTTCCATGATGATACCGAGTTTTTCAACGAAAAAGATGATTTGTCATCAGACTCGTTAAGTTCTCATGATGTTGAAATTAAAGAAGGAGATGCATATGTTGTTCAGAATGAAGATCACGAAGAATCAAAAGGGGGAAAAATTGAAAGTATTTCTCATGATGGCCTCGAGTATGAGAATCAACAAGATGATAAATCATCAGACACGTCAACTTCTCAAGATATTGAAAATCTGGAAGGAGATGGTTATGTTGTTAAGAATGAAGATCACGAAGAATCAAAACAGGCGAAAAGTCAAAATATTTCTTATGAGGGACCCAAGTGTGAGAATGAACTAGACGATATATCTTCAAACACATCAAGTTCCAAAGATGTCGAAAATTTTCAAGGAGATACCTATGTTGTTCAGAGTGTCGATCTTGAAGAATCAAAACAGGTGAATAGTCAAAATATTTCTCATGATCGCCCTGAGTATGAGAATGAACATGATAAATCGTTAGACACTTCAAGTTCTGAAGATATTGAAAAACTGGAAGGGGATACTTATGTTGTTCCGAGTGAAGATCACGAAGAATCAAAACAGGCAGAAAGTCTAAATATTTCTCATGATGGCCTCGGGTATGAGAATGAACAAGATGATAAATCATCAGACACATCAAGTTCCCAAGCTATTGAAAACCTGGTAGGAGATACTTATGCTGTTAAGAATGAAGATCATGAAGAATCAAAACAGGCGAAAAGTGAAAATATTTCTCATGATGGCCCCAAGTATGAGAATGGACAAGACGATATATCATCAGACACGTCAAGTTCTCAAGATGTTGAAAAACAGCAAGGTGATGCAATCACCATTGACAACAAAGATTCAAAGGAGGAAAAATTTGAAACCATGGGTTGTGATGGTCCTGGGTTTGAGACAAATCTCGATGATATATTAGATAATATATACGGGGTGATAGATCTAGAGTCTAACACTCCGAAGAGGAAGATAGACAATGTGATTGAAAAATGGAAATTGGCTAATATAGTAGGTGTGAATAAGGATTTGCAGTGTGGAACTCAGGAAGAAAACATGGAGACCAGTTGTAATTCCATAAAATCTGATGTTCAAAATGACTTCGCGAAAGAGAAGGTTGAAAATAGAACTTTGGGTTCATATTCACCACAAATGAATCGAAAGATAGATAACACTTCAATTGAGGACACTACTATGAATCCTAAAGTTAATGAAATAGATACTCCACGTGTGGTTGAGAAGGCTGTAGCGCTTAAAAATATGGTGAGAGAGAAAAGTATAGTAGCAGTCTCCACTCTGCTGCGTCGATTTTCTATAAAATTTGAAGAAGGTTATGCGTGTAATTCTGATAATAAAGGTAATGGTGTTTCAGATTTATTAGGAGACAGTGAATCCAAAGAGGTTCCTGAGAAAACAGCAGAGAAAATGACTTATCAGATGGATGATGAACCGGTAACTGAAGGTCCTCTGCGACCTATAGCCATGAAAGGAAGGATTATACTGTACACAAGATTAGGATGCCAAGAATCTAAAGAGGTTAGAAGATTTTTGTATATGAAAAGGCTTAGATATGTTGAAATCAACATTGATGTGTACCCTAATAGAAAGATGGAGCTTGAAAAGATTTCTGCATCTACTTCTGTTCCCAAAGTTTTTTTCAATGGAATACTAATAGGAGGCATGAGCGAATTAAAGACCTTAAATGATTCTGGAAAGCTTAATGATAAGATTGACTTCCTGATAACTGAACCACCGTCATTTGAAGGACCATTTCCACCGCTTTCTGGAGAGGATGATGTGTCAAGTAGTGGAGCAATTGATGAATTGGCCCTAATTGTCCGCAAAATGAAAGAATCTATTGTTGTGAAGGATCGATTTAGCAAATTGAGAAGGTTTACTAATTGCTTTCTTGGCTGTGAAGCTGTGGACTTCTTAACAGCAGATCAATATTTGGAAAGGAAGGAGGCTGTTGAGTTTGGACGAAAACTCGCTAGCAAGCTCTTCTTTCAGCATGTTTTTGATAGTGAGAATCTATTTGAGGATGGTAATTACTTTTATCGGTTTTTGGATGACGATCCAATTGTGGCATCTCAATGTCAAAATATTCCAAGGGGGATAATTACTGTGAAACCTAAGCCTATCACAGAAATTGCATCAAGGCTGAGATTACTGTCCTATGCAATGTTTGAAGCCTACGCCTCTGAAGATGGACGTCACGTTGATTACCGAAGTATGCATGGAAGTGAAGAGTTTGCAAGGTATCTAAGAATCGTAGAAGAGCTACAAAGAGTGGAAATATTTGATTTGTCTAGACAAGATACAATTGCTTTCTTTCTTAATCTGTATAATATGATGACCATCCATACAATCTTAGTATGGGGTCATCCAGCTGGAGCACTGGAAAGAAGGAAATTATTTGGAGATTTCAAATATGTTATTGGTGGGTCCGCCTACTCACTTTCAGCTATTCAGAATGGAATTTTGAGGGGGAACCAACGACAGCCATATACCCTTATGAAGCCATTTGGTGTAAAAGATAAACGTTTAAAGGTGGCACTCTCTTCCCCAGAGCCTCTCATTCATTTTGCTTTAGTATGTGGTACTCGATCCGGGCCTGCACTTCGGTGCTATTCTCCTGGAGACATTGACTCAGAATTAATGGATGCAGCTTGTAATTTCCTTACAAAAGGTGGCATTTTGATAGATTTTACTGCAAAGGTTGCATATGCCAGTAAGATCCTTAAATGGTTCAGTGTAGATTTTGGCAAGAATGAGGTAGAGGTTATGAAGCATGTATCAATATACTTAGATCCATCGGAGTCAGAGCTATTGTTTGACTTACTTGCCAGTTCTGAGTTGAAGGTGATATATCAGCCTTATGACTGGGGTTTGAACTGTTAG 3036 0.3781 MEDEETNEASHRAVGKLEGDAFIVQNEDLGKQSEGEKMRNIFHDDTEFFNEKDDLSSDSLSSHDVEIKEGDAYVVQNEDHEESKGGKIESISHDGLEYENQQDDKSSDTSTSQDIENLEGDGYVVKNEDHEESKQAKSQNISYEGPKCENELDDISSNTSSSKDVENFQGDTYVVQSVDLEESKQVNSQNISHDRPEYENEHDKSLDTSSSEDIEKLEGDTYVVPSEDHEESKQAESLNISHDGLGYENEQDDKSSDTSSSQAIENLVGDTYAVKNEDHEESKQAKSENISHDGPKYENGQDDISSDTSSSQDVEKQQGDAITIDNKDSKEEKFETMGCDGPGFETNLDDILDNIYGVIDLESNTPKRKIDNVIEKWKLANIVGVNKDLQCGTQEENMETSCNSIKSDVQNDFAKEKVENRTLGSYSPQMNRKIDNTSIEDTTMNPKVNEIDTPRVVEKAVALKNMVREKSIVAVSTLLRRFSIKFEEGYACNSDNKGNGVSDLLGDSESKEVPEKTAEKMTYQMDDEPVTEGPLRPIAMKGRIILYTRLGCQESKEVRRFLYMKRLRYVEINIDVYPNRKMELEKISASTSVPKVFFNGILIGGMSELKTLNDSGKLNDKIDFLITEPPSFEGPFPPLSGEDDVSSSGAIDELALIVRKMKESIVVKDRFSKLRRFTNCFLGCEAVDFLTADQYLERKEAVEFGRKLASKLFFQHVFDSENLFEDGNYFYRFLDDDPIVASQCQNIPRGIITVKPKPITEIASRLRLLSYAMFEAYASEDGRHVDYRSMHGSEEFARYLRIVEELQRVEIFDLSRQDTIAFFLNLYNMMTIHTILVWGHPAGALERRKLFGDFKYVIGGSAYSLSAIQNGILRGNQRQPYTLMKPFGVKDKRLKVALSSPEPLIHFALVCGTRSGPALRCYSPGDIDSELMDAACNFLTKGGILIDFTAKVAYASKILKWFSVDFGKNEVEVMKHVSIYLDPSESELLFDLLASSELKVIYQPYDWGLNC 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03139 1011 MobiDBLite consensus disorder prediction 28 334 - -
Trre9g03139 1011 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 665 733 IPR000591 GO:0035556
Trre9g03139 1011 SMART DEP_3 661 735 IPR000591 GO:0035556
Trre9g03139 1011 MobiDBLite consensus disorder prediction 320 334 - -
Trre9g03139 1011 Pfam Protein of unknown function, DUF547 813 939 IPR006869 -
Trre9g03139 1011 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 248 1011 - -
Trre9g03139 1011 MobiDBLite consensus disorder prediction 272 300 - -
Trre9g03139 1011 SUPERFAMILY "Winged helix" DNA-binding domain 653 743 IPR036390 -
Trre9g03139 1011 MobiDBLite consensus disorder prediction 121 137 - -
Trre9g03139 1011 Gene3D - 647 740 IPR036388 -
Trre9g03139 1011 ProSiteProfiles DEP domain profile. 661 735 IPR000591 GO:0035556
Trre9g03139 1011 ProSiteProfiles Glutaredoxin domain profile. 532 629 - -
Trre9g03139 1011 MobiDBLite consensus disorder prediction 152 193 - -
Trre9g03139 1011 Pfam Glutaredoxin 544 601 IPR002109 -
Trre9g03139 1011 Gene3D Glutaredoxin 539 624 - -
Trre9g03139 1011 CDD DEP 653 732 - -
Trre9g03139 1011 MobiDBLite consensus disorder prediction 30 104 - -
Trre9g03139 1011 SUPERFAMILY Thioredoxin-like 540 622 IPR036249 -
Trre9g03139 1011 MobiDBLite consensus disorder prediction 194 237 - -
Trre9g03139 1011 MobiDBLite consensus disorder prediction 301 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03139 Trre-Chr9 39676001 39682362 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03139 - - tpra:123905231 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03139 9 39676001 39682362 Trre9g03139 9 39676001 39682362 ECH
Trre9g03139 9 39676001 39682362 Trre5g02271 5 17194617 17198851 PCT