Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02271 ATGGAAAATCAGCATTTGTCAGAGACAAAGGCAGCAAGTTCCCAAGAGGTTGAGAAGCTGCAAGAAGATGCTTCTGCCATTAAGATTGAAGATCAGGAGAAAGAGGAAAAAACACAGAATATTGGTGCTCATGATGACACTGAGTTTGACAACAAACTGGATGATATATCGGATGTGATAAAGGACGTCAAAGATGGAAGGACCAAGTCTGATACTGATGCAGAAATAAATGACAATGTCATTGGAGATTCTGATTTGGCCCAGGCCAAAACTGAAACTGAAGTCAAACATTCTGGTGATAAGGTTGAGGCCGGCAGAGATTTTGAACCTAAAAGTGAAGAAAGAAATCTAGATGATAACTCGGGACAGGATGATTTGGCAAAAGAGGAGAATGTCGGGGGAGGCACGGAATCCACAAATATGGATCAGAAGGCTGATGAAATTCCAAACGAGGACAGCAATTTGGACCCTGTATTTGATGGAACAGAGATTCCAGGGATGGAAGCTAACCGGAGCACATCTATCCGTAAGTCGGATGGTGATCAGGACACTCCAGGTGTGGTTGAAAAGGCAGTAGCTCTTAAAAATCTTGTCAAGGAGAAAAGTGCAGTGGCGGTCTCCACTGTGCTGCGCCGCCTTTCTGGAAAAAGTGATGAAGCTGCTGTGGGTAGTTTTGATGATGAAGGCAAGGATATTTCAGATATCTCAGAAGTTAATGAAGCCAAATTGGTTTCCGAGAAGCCTGTGGAGAAATCTGCCTGGAATCCTTTAAATTATATTAAGAAGTCATCTGATGTTGATGCGGAAAACAAAACAGATGGTCCACCACTACCAATAGCCTTGAAAGGAAGGATTATATTGTACACAAAACTAGGGTGCCAAGAGTCGAAAATATTTAGGCTATTTTTACGCACAAAAAGGCTTAGGTATGTGGAAATCAATATAGATGTATACCCCGGTAGAAAGATGGAGCTGGAGAAGATTTCTGGATCTACTTCTGTTCCCAAGTTGTTTTTCAATGAAATCTGTATTGGAGGCTTGAGTGAGCTAAAAAACTTGGATGAGTCTGGAAAGCTTGACGAGAAGATTGACTTTCTTATTACTGAAGCACCATTATTTGAAACTCCGTCACCACCTTTTTCAGGAGAGGATGATATTTCCAGCACTGGAGCAGTTGATGAATTGGCTCTTATTGCTCGCAAAATGAAAGAATCTATTATTGTGAAGGACAGATTATACAAAATGCGCAGGTTCACCAACTGTTTTCTAGGCTCAGATGCTTTAGACTTCTTATCAGAAGATCAATATTTGGAAAGGCAAGAGGCTGTTGAATTTGCTCGGAAGCTTGCCAGCAAACTCTTCTTTCGACATGTTCTTGATGAGAATCTATTTGAGGATGGTAATCACGTGTATCGGTTTTTGGATGATGATCCAATTGTGGTGTCACAATGTCACAACATTCCTAGGGGGATTATTACTGTCAATCCAAAGCCTATAGCAGAAATTGCATCAAGGCTGAGGTTTCTGGCCTCTGCAATGTTTGAAGCCTATGCTTTTGAAGATGGACGTCGTGTTGATTATACGAGTTTACATGGAAGTGAGGAGTTTGCAAGGTATCTGAGAATAGTAGAAGAGCTCCAAAGAGTGGAAATATGGGACATGTCTAGAGAAGAGAAGCTTGCTTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTCAATATTGGGTCATCCAGAAGGAACATTAGAAAGAAGGAAATTATTTGGAGAGTTCAAATATGTTATCGGTGGCTCCACGTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCTGCGACCTCCATATAACCTTAAGAAGCCATTTGGTGCAAAAGATAAACGCTCAAAGGTGGCACTCCCTTACCCTGAGCCACTGATTCATTTTGCTTTGGTATGTGGCACCCGATCTGGGCCTGCACTTCGGTGCTACTCTCCTGGAAAAATTGATGAAGAATTATTGGATGCAGCTCGTAACTTCCTGAGAAGTGGAGGCCTTGAAATTGATTTGACTGCGAAGGTTGCACATGCTAGTAAGATTCTTAAATGGTATAGCATAGATTTTGGCAAGAGCGAGGTTGAGGTGATCAGGCATGTGTCAAACTACTTAGATCCAGCTGACTCCGAAATATTATTGGACCTGCTTGCCTCTTCTGAGTTGAAGGTGGTATATCAGCCTTATGACTGGGGTTTGAACTGCTAG 2256 0.4167 MENQHLSETKAASSQEVEKLQEDASAIKIEDQEKEEKTQNIGAHDDTEFDNKLDDISDVIKDVKDGRTKSDTDAEINDNVIGDSDLAQAKTETEVKHSGDKVEAGRDFEPKSEERNLDDNSGQDDLAKEENVGGGTESTNMDQKADEIPNEDSNLDPVFDGTEIPGMEANRSTSIRKSDGDQDTPGVVEKAVALKNLVKEKSAVAVSTVLRRLSGKSDEAAVGSFDDEGKDISDISEVNEAKLVSEKPVEKSAWNPLNYIKKSSDVDAENKTDGPPLPIALKGRIILYTKLGCQESKIFRLFLRTKRLRYVEINIDVYPGRKMELEKISGSTSVPKLFFNEICIGGLSELKNLDESGKLDEKIDFLITEAPLFETPSPPFSGEDDISSTGAVDELALIARKMKESIIVKDRLYKMRRFTNCFLGSDALDFLSEDQYLERQEAVEFARKLASKLFFRHVLDENLFEDGNHVYRFLDDDPIVVSQCHNIPRGIITVNPKPIAEIASRLRFLASAMFEAYAFEDGRRVDYTSLHGSEEFARYLRIVEELQRVEIWDMSREEKLAFFINLYNMMAIHAISILGHPEGTLERRKLFGEFKYVIGGSTYSLSAIQNGILRGNLRPPYNLKKPFGAKDKRSKVALPYPEPLIHFALVCGTRSGPALRCYSPGKIDEELLDAARNFLRSGGLEIDLTAKVAHASKILKWYSIDFGKSEVEVIRHVSNYLDPADSEILLDLLASSELKVVYQPYDWGLNC 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02271 751 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 407 473 IPR000591 GO:0035556
Trre5g02271 751 Pfam Glutaredoxin 285 341 IPR002109 -
Trre5g02271 751 Gene3D Glutaredoxin 281 365 - -
Trre5g02271 751 Pfam Protein of unknown function, DUF547 553 679 IPR006869 -
Trre5g02271 751 MobiDBLite consensus disorder prediction 15 76 - -
Trre5g02271 751 ProSiteProfiles DEP domain profile. 402 475 IPR000591 GO:0035556
Trre5g02271 751 Coils Coil 3 37 - -
Trre5g02271 751 CDD DEP 394 472 - -
Trre5g02271 751 MobiDBLite consensus disorder prediction 1 184 - -
Trre5g02271 751 ProSiteProfiles Glutaredoxin domain profile. 273 370 - -
Trre5g02271 751 MobiDBLite consensus disorder prediction 89 126 - -
Trre5g02271 751 SUPERFAMILY Thioredoxin-like 283 364 IPR036249 -
Trre5g02271 751 SUPERFAMILY "Winged helix" DNA-binding domain 395 479 IPR036390 -
Trre5g02271 751 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 9 751 - -
Trre5g02271 751 Gene3D - 385 479 IPR036388 -
Trre5g02271 751 SMART DEP_3 402 475 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02271 Trre-Chr5 17194617 17198851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02271 - - tpra:123896937 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02271 5 17194617 17198851 Trre5g02271 5 17194617 17198851 ECH
Trre9g03139 9 39676001 39682362 Trre5g02271 5 17194617 17198851 PCT