Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03074 ATGAAAACCAAAAACAGCAAGGTGGGAAATGAATTTGGTTGTGGTTTCATGGGAAGAATTCTCCATCTCAAAAGTCCTAGGCTAAGAAACTCATTAGTTCATTCCCTACCCATGAAAACTAACAAAAATGATCATTTCACAAATGAACCAAAGTTGTCTCCAAAAAAAGAATCAAATGTTCCACAAAGAATCTCCAACAACACTATTAATCCAACAAACCGGAAGCGTATTATTTTCGATACTACTTCAAGAAGTTCAGCATCATCATCGTCCACTGGTAGTTCAACCCATAAAAGGGTTGAACAAAACCATAACACGAATGATGATGCCAAACTTCCAATAGAATCAACCCGAAATTCTCTACAACTTGCTAGAATAAGCACTATTCGCACGTGCGAAAACGAGAACAAGTCCACTGCCAAAAACTTTGCTCCATTGAAACTTACTGGAAATTTGCTTGTGAACAATACACCAAGAAGAAAGAGTGTTGAATGTTTACCTAAGCATTCAGAGTTAAACTCTATGTCAAGCTTTTACAATAGTAATAATAATAATGGAAGAAAAGTTGTTATGGGGAATATCATGAGAAAGAATAGTAATGAACTTTCACAGTTTCTAAATCAAAGACACAATAGTGTTGACCCTGAAGTGTTGAAATCTAAGGGAAATGAAGCATATAAGAAGGGTAAGTTTGAAGAAGCTTTGGCTTTGTATGAAAAAGCTATTTCTCTTGATTCCAATAAGGCAACTTATCATTGTAACAAGAGTGCAGCTTTGATTGGATTAGGAAGGTTTCAAGAAGCAATTCTTGAATGTGACGAATCTATCCGGTTGGATCCTTCTTATAACAGAGCTCACAATCGTTTGGCAACAATATATTTCAGATTAGGAGAAGCAGAGAAGGCATTAGATTGCAACAGATCAACCTCATATATTGATTCTGTACTAACTTTTCAAGCTCAAGCTCTACAAAATCACATTAACAAATGCATTGAAGCTAGAAAATTCAATAAATGGAATGTTATACTAAAGGAAACACATTCTGCATTATCCTTAGGTGTTGATTCAGCACCACAGATCTATGCTTTACAAACTGAAGCCTTATTGAAGCTGTTAAGATATGAAGAGGCACAATCTGTTTATGATAAAATGCCAAAATTTTCGATTGATTGGTGTAACAAGATATTTGGAATAGCTACTAGTTCTTACCTGTTGATGATAGGTTCACAGGTTTACTTGGCATCCGGCAGGTTTGAGGATGCTGTGACAATAGCCGAAAAATCTGGTAGAGTTGATCCAACCAATAGAGAGGTGAATAGTGTGTTAAGAAGAGCCAGGGCTGTAACATCAGCTAGAATGAGTGGAAACTTGCTCTTCAAGGCATCAAAATTTATGGAAGCATGTGCAGTATACAATGAAGGGCTTGATCATGATCCAAACAACTCGGTTCTGCTATGCAACCGAGCAGCATGTCGTTCTAAGCTAGGCCAATATGAAAAAGCAATTGAAGATTGTGATGCAGCACTTCAGCTTAATCCTTGTCATAGCAAAGCAAAGCTAAGGAGGGCATATTGTAATGCCAAGTTGGAAAGATGGGATGTTTCCATTCAAGACTATGAAATGCTGATAAGAGAAAAGCCAGGAGATGAAGAAGTTGCAAAGGCTTTGTTTGAGGCTCAGCTCCAACTCAAGATGCTACATGGTGAAGATATTAAGGATTTGAAATTTGGTTCAAATTTGATTTTTATTTCAAGTAATGATCGTTTCAGACATTATGTAACCTCACCTGGTATGACTGTTGTGCTGTTTAGTAACAAGGGAACACACAAGCAAGTGTTTATGGTTTTGGAACAAACCAGCAAGAGATTCCCATCTGTTAATTTCCTCAAGGTGGAGATTGAAGACCACCCGTACTTGGCGAAATCAGAAGGTGTTAACTCAACTCCATCCTTCAAGATATACAAGAATGGATCAAGGGTTAAAGAGATTTCAGGCAACAATCATGCATTGTTAGAAAGATCAGTTAAATTGTATAGCAGCTGA 2043 0.371 MKTKNSKVGNEFGCGFMGRILHLKSPRLRNSLVHSLPMKTNKNDHFTNEPKLSPKKESNVPQRISNNTINPTNRKRIIFDTTSRSSASSSSTGSSTHKRVEQNHNTNDDAKLPIESTRNSLQLARISTIRTCENENKSTAKNFAPLKLTGNLLVNNTPRRKSVECLPKHSELNSMSSFYNSNNNNGRKVVMGNIMRKNSNELSQFLNQRHNSVDPEVLKSKGNEAYKKGKFEEALALYEKAISLDSNKATYHCNKSAALIGLGRFQEAILECDESIRLDPSYNRAHNRLATIYFRLGEAEKALDCNRSTSYIDSVLTFQAQALQNHINKCIEARKFNKWNVILKETHSALSLGVDSAPQIYALQTEALLKLLRYEEAQSVYDKMPKFSIDWCNKIFGIATSSYLLMIGSQVYLASGRFEDAVTIAEKSGRVDPTNREVNSVLRRARAVTSARMSGNLLFKASKFMEACAVYNEGLDHDPNNSVLLCNRAACRSKLGQYEKAIEDCDAALQLNPCHSKAKLRRAYCNAKLERWDVSIQDYEMLIREKPGDEEVAKALFEAQLQLKMLHGEDIKDLKFGSNLIFISSNDRFRHYVTSPGMTVVLFSNKGTHKQVFMVLEQTSKRFPSVNFLKVEIEDHPYLAKSEGVNSTPSFKIYKNGSRVKEISGNNHALLERSVKLYSS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03074 680 Pfam Tetratricopeptide repeat 484 513 IPR001440 GO:0005515
Trre9g03074 680 SUPERFAMILY TPR-like 453 564 IPR011990 GO:0005515
Trre9g03074 680 MobiDBLite consensus disorder prediction 39 113 - -
Trre9g03074 680 Pfam Thioredoxin 587 669 IPR013766 -
Trre9g03074 680 Gene3D Glutaredoxin 575 679 - -
Trre9g03074 680 Pfam Tetratricopeptide repeat 259 303 - -
Trre9g03074 680 Gene3D Tetratricopeptide repeat domain 213 567 IPR011990 GO:0005515
Trre9g03074 680 SMART tpr_5 516 549 IPR019734 GO:0005515
Trre9g03074 680 SMART tpr_5 249 282 IPR019734 GO:0005515
Trre9g03074 680 SMART tpr_5 283 316 IPR019734 GO:0005515
Trre9g03074 680 SMART tpr_5 215 248 IPR019734 GO:0005515
Trre9g03074 680 SMART tpr_5 482 515 IPR019734 GO:0005515
Trre9g03074 680 SMART tpr_5 401 435 IPR019734 GO:0005515
Trre9g03074 680 SMART tpr_5 448 481 IPR019734 GO:0005515
Trre9g03074 680 SUPERFAMILY TPR-like 215 437 IPR011990 GO:0005515
Trre9g03074 680 SUPERFAMILY Thioredoxin-like 525 668 IPR036249 -
Trre9g03074 680 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515
Trre9g03074 680 Pfam TPR repeat 222 254 - -
Trre9g03074 680 MobiDBLite consensus disorder prediction 53 100 - -
Trre9g03074 680 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 31 676 IPR044534 -
Trre9g03074 680 ProSiteProfiles TPR repeat profile. 215 248 IPR019734 GO:0005515
Trre9g03074 680 CDD TRX_family 589 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03074 Trre-Chr9 39103899 39107199 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03074 K09527 - gmx:100782846 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03074 9 39103899 39107199 Trre5g02315 5 17699279 17702297 PCT