Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02649 ATGGGCACTTCTAGCAACAATTTTCTTCAAGTTATCCTCAAAAACTTCGATGTTCTTGCTCTGCCTTTGGTCACCCTCGTTTATCCATTATATGCTTCAATTAAAGCTATAGAGACTAAGAATATTGTTGATGACCAACAATGGCTCACATATTGGGTTCTCTACTCTTTGATCACACTCTTTGAGCTCACATTTGCCAAACTTCTTGAACTGCTTCCAATTTGGCCTTATGCCAAGTTGATACTGAGTTGTTGGTTGGTTCTTCCTCACTTTAATGGGGCAGCACATGTTTATAGACACTATCTTAGACCATTCTACATGAACCCACAATTGCCAAAAATGCCGCAGATGCCGGGAACTTCCCAAATGTGGTATGTTCCACGGAAGAACATATTTAGTAAGCAAGATGATGTTCTAACCGCCGCTGAAAGATATATGCAAGAACACGGAACAGAAGCATTTGAAAGACTCATTACCAAGACTGACAGAGAAACTAGAGCAAGGAGGAGCGGAAACTACATGATCTTTGATGATGATTATAGATATTGA 549 0.3989 MGTSSNNFLQVILKNFDVLALPLVTLVYPLYASIKAIETKNIVDDQQWLTYWVLYSLITLFELTFAKLLELLPIWPYAKLILSCWLVLPHFNGAAHVYRHYLRPFYMNPQLPKMPQMPGTSQMWYVPRKNIFSKQDDVLTAAERYMQEHGTEAFERLITKTDRETRARRSGNYMIFDDDYRY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02649 182 PANTHER HVA22-LIKE PROTEINS 22 149 IPR004345 -
Trre9g02649 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02649 Trre-Chr9 32987606 32991645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02649 K17279 - gmx:100306464 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02649 9 32987606 32991645 Trre9g02649 9 32987606 32991645 ECH
Trre9g02649 9 32987606 32991645 Trre15g04193 15 52553030 52554724 PCT