Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04193 ATGGGAGGATCTGGATCTGGAGCCGGTAGTTTCTTTATGGTTCTTCTCAGAAATTTTGATGTTCTTGCTGGGCCTGTGATTAGTCTTGTTTATCCTTTATATGCTTCGGTTAGGGCAATTGAGAGCAAGTCTCCTGTGGATGATCAACAGTGGCTAACTTATTGGGTTCTGTATTCCTTAATCACTCTTTTTGAACTTACTTTTGCCAAAATTCTTGAATGGATTCCTATATGGCCATATGCAAAGCTGATTCTAACCTGCTGGTTGGTCCTTCCTTATTTTACTGGCGCTGCTTATGTTTATGAGCATTATGTAAGACCCTTCTTGGCCAATCCTCAGACCATTAACATCTGGTATGTTCCAAGGAAAAAGGACGTCTTCTCTAAGCCAGATGACATCATAACTGCTGCAGAGAAGTACATCAAAGAGAATGGAACAGAAGCATTTGAGAATCTGATTCATAGGGCCGATAAATCAAAATGGGGCGGTAGTCATCATACAATGTATGATGAGACTTATTGA 522 0.4042 MGGSGSGAGSFFMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVRPFLANPQTINIWYVPRKKDVFSKPDDIITAAEKYIKENGTEAFENLIHRADKSKWGGSHHTMYDETY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04193 173 Pfam TB2/DP1, HVA22 family 32 108 IPR004345 -
Trre15g04193 173 PANTHER HVA22-LIKE PROTEINS 25 142 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04193 Trre-Chr15 52553030 52554724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04193 K17279 - gmx:100808701 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04193 15 52553030 52554724 Trre15g04193 15 52553030 52554724 ECH
Trre9g02649 9 32987606 32991645 Trre15g04193 15 52553030 52554724 PCT