Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02646 ATGGAATTTTTGTTCAATTTTGTATTTTGGAATGGTTCATCAATTACCCTTTTTCTGATTTTGGTTTCTTTGCTTCGTTTCGGTTCCTTTTCAACACTGTTCATTGATTTTGTAGAGACATGTTGGAGGGTCGTTCTTGTGTTGTTCCGAGACATCAAAAATGGAAAAAGACCAATGGAAATTGATGCTGCTGAGGATGAACATCATCCTAGGAAGTGTACTAAGATGTTGGAATCTTGTCACATAGTTGAAACGGTTTGTATCTCGTTTCAACAACCTAAGGATTCTGATGTTTCTCAAATGAATCAGAAAACCATTGAGCCAATGAATGATGGTGATTCAATGGATTCATCAGATTCTGGTATTCAGCAATCTGATGAGGAACAGCATGCTGGAGATTCGTCGGATTCTGTTTCTCTTTTGCCACGGATGAACCGAGACAGCTCAATCGCTTGTCTTAGCCGCTGTTCAAGGTCGGATTATGGTTCGCTTGCTTCGTTGAATAGTAGCTTTCGTAACATAATCCGAAGTGGCGAGCTCTATAGATGGAGGAGAATAAACGGCATCATGGAACATTGGGTTTATTTTTCCTGTGCACTTCTTGAATGGGAAGCGTATGATCCTATTCGTCAAAGGTGGATGCATTTGCCGAGAATGGCTTCGAATGAATGCTTCATGTGTTCTGATAAGGAATCTTTAGCTGTAGGAACCGAACTTCTTGTGTTTGGGAGGGAGCTTAGATCTCATGTTATTTATAGATACAGTCTTTTGACTAACTCATGGTCCTCGGGAATGAGAATGAATGCTCCAAGATGTTTGTTCGGCTCCGCGAGCCTCGGAGAGATTGCAATATTAGCAGGTGGTTGTGATTCGGAGGGACGCATACTTGACTCTGCTGAACTATACAACTCCGAGACACAAACATTTGAGCTACTCCCTGCAATGAAAAAACCGCGGAAGATGTGCTCTGGTGTATTCATGGATGGAAAATTTTATGTTGTAGGTGGAATCGGAGGACGCGATTCAAAGCTTCTTACGTGTGGTGAGGAGTACAATTTACAGACTAGAACTTGGACGGAGATTCCTAACATGTCCCCTGGACGAAGTACTAGGGGCTCTGAGATGCCTGCTGCAACCAAAGCACCGCCTCTCATTGCTGTTGTAAATAATGAACTGTATGCTGCTGATTATGCTGACATGGAAGTAAAGAAGTACGACAAGGAAAGAAAATTGTGGATTACTATCGGGAGACTTCCGGAACGAGCAATGTCGATGAATGGTTGGGGTCTTGCCTTTAGGGCTTGTGGAAATATGCTTATTGTCATTGGTGGACCTAGGACTCACGGTGAAGGTTACATTGAACTCAATTCTTGGGTCCCTAGCGAAGGACCTCCGCAATGGCGTCTACTTGATCGAAAACGATCCGCAAACTTTGATTCATCGGGATGA 1449 0.43 MEFLFNFVFWNGSSITLFLILVSLLRFGSFSTLFIDFVETCWRVVLVLFRDIKNGKRPMEIDAAEDEHHPRKCTKMLESCHIVETVCISFQQPKDSDVSQMNQKTIEPMNDGDSMDSSDSGIQQSDEEQHAGDSSDSVSLLPRMNRDSSIACLSRCSRSDYGSLASLNSSFRNIIRSGELYRWRRINGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTFELLPAMKKPRKMCSGVFMDGKFYVVGGIGGRDSKLLTCGEEYNLQTRTWTEIPNMSPGRSTRGSEMPAATKAPPLIAVVNNELYAADYADMEVKKYDKERKLWITIGRLPERAMSMNGWGLAFRACGNMLIVIGGPRTHGEGYIELNSWVPSEGPPQWRLLDRKRSANFDSSG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02646 482 FunFam F-box/kelch-repeat protein SKIP11 186 472 - -
Trre9g02646 482 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 129 478 - -
Trre9g02646 482 SUPERFAMILY Kelch motif 200 470 IPR015915 GO:0005515
Trre9g02646 482 MobiDBLite consensus disorder prediction 105 141 - -
Trre9g02646 482 Pfam Kelch motif 318 365 IPR006652 GO:0005515
Trre9g02646 482 Pfam Kelch motif 270 315 IPR006652 GO:0005515
Trre9g02646 482 SMART kelc_smart 330 378 IPR006652 GO:0005515
Trre9g02646 482 SMART kelc_smart 238 281 IPR006652 GO:0005515
Trre9g02646 482 SMART kelc_smart 282 329 IPR006652 GO:0005515
Trre9g02646 482 Gene3D - 186 468 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02646 Trre-Chr9 32881994 32885401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02646 - - gmx:100818865 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02646 9 32881994 32885401 Trre9g02646 9 32881994 32885401 ECH
Trre9g02646 9 32881994 32885401 Trre15g04187 15 52507233 52508375 PCT