Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02254 ATGGCAGGAGGAGGAGGAGGAGCTGCAGCACCACCTAAACAGGAAGAGCTTTTGCCTCATCCTGTTAAAGATCAACTTCCAAATGTTTCATACTGTATCACTAGTCCTCCTCCATGGCCGGAAGCAATTATACTCGGTTTTCAACATTACTTGGTGATGCTGGGGACAACTGTTTTGATACCAACTTCTCTAGTTTCACAGATGGGAGGGGGGAATGAAGAAAAAGCAAAGATGATCCAGACTATTTTGTTCGTTGCTGGTATAAACACTTTGGTTCAAACACTTTTTGGGACTCGTCTGCCAGCAGTTATCGGAGGATCGTATACCTTTGTGCCAACAACCATTTCGATCATCTTGGCTGGTCGCTACAATGATATTCTCGATCCTCAGGAGAAATTTAAGAGTATAATGCGTGGAACGCAGGGCGCTCTTATTGTTGCTTCATCCCTCCAAATTATTGTTGGATTCAGTGGCCTTTGGCGCAATGTAGTGAGGTTCATAAGCCCTCTCTCTGCTGTTCCCTTGGTTGCTCTGTCTGGCTTTGGACTTTATCAGCTCGGTTTTCCTATGCTTGCTAAATGTGTCGAGATTGGACTGCCAGAAATTGTAATCCTACTACTATTTTCACAGTACATTCCTCATTTGATAAAAGGAGAAAGACATATCTTTGATCGCTTTGCGGTTATATTCTCTGTGGCAATTGTGTGGATTTATGCTCATATTCTCACTGTCGGAGGAGCTTATAAAAATGCAGAAACTGAGACTCGGAATACTTGCAGAACTGACCGTGCCGGAATCATAAGTGGTGCAAAGTGGATTTATGTTCCATATCCTTTTCAATGGGGAGCTCCTACATTTAATGCTGGAGAAGCTTTTGCTATGATGGCTGCTTCATTTGTTGCATTAATAGAGTCAACCGGTGGTTATATTGCTGTTTCAAGGTATGCAAGTGCAACTCCATTGCCACCTTCAGTACTTAGCCGTGGCATCGGTTGGCAGGGGGTAGGAATTCTATTGTCCGGGATCCTTGGGTCCGGGAATGGATCATCAGTTTCCATAGAGAATGCTGGACTGTTAGCTTTGACGCGAGTTGGTAGCCGAAGGGTTGTTCAAATATCCGCAGGATTCATGATCTTTTTCTCCATTCTTGGAAAGTTTGGAGCTGTGATTGCTTCAATCCCAGCACCGATAGTTGCAGCATTATATTGCCTTTTCTTTTCCTATGTCGGTTCAGCAGGCCTCAGTTTCCTTCAGTTTTGTAATTTGAACAGCTTTAGAACCAAATTCATCATAGGATTCTCCATTTTCATGGGATTCTCTATACCACAATACTTCAAGGAGCACACAGCAATTAAGCACTATGGTCCTGTGCACACTAATGCTAGATGGTTCAACGACATGATCAATGTCCCTTTCTCATCAGAACCATTTGTTGCTGGTATATTAGCAATTTTCTTGGATGCAACATTGCATAAGAATGATAGCCAGACTCGTAAAGATAGAGGCATGCATTGGTGGGACAGGTTCAGTTCATTCAAGAAAGATACAAGGAGTGAGGAGTTTTACTCTCTACCTTTCAATCTCAACAAGTTTTTCCCTTCTGTGTGA 1608 0.4291 MAGGGGGAAAPPKQEELLPHPVKDQLPNVSYCITSPPPWPEAIILGFQHYLVMLGTTVLIPTSLVSQMGGGNEEKAKMIQTILFVAGINTLVQTLFGTRLPAVIGGSYTFVPTTISIILAGRYNDILDPQEKFKSIMRGTQGALIVASSLQIIVGFSGLWRNVVRFISPLSAVPLVALSGFGLYQLGFPMLAKCVEIGLPEIVILLLFSQYIPHLIKGERHIFDRFAVIFSVAIVWIYAHILTVGGAYKNAETETRNTCRTDRAGIISGAKWIYVPYPFQWGAPTFNAGEAFAMMAASFVALIESTGGYIAVSRYASATPLPPSVLSRGIGWQGVGILLSGILGSGNGSSVSIENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVIASIPAPIVAALYCLFFSYVGSAGLSFLQFCNLNSFRTKFIIGFSIFMGFSIPQYFKEHTAIKHYGPVHTNARWFNDMINVPFSSEPFVAGILAIFLDATLHKNDSQTRKDRGMHWWDRFSSFKKDTRSEEFYSLPFNLNKFFPSV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02254 535 NCBIfam purine/pyrimidine permease 43 452 - -
Trre9g02254 535 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 11 533 - -
Trre9g02254 535 Pfam Permease family 41 446 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02254 Trre-Chr9 25152004 25156572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02254 9 535 Organic Solute Cotransporters AT1G60030 81.025 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02254 - - gmx:100814601 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02254 9 25152004 25156572 Trre15g02098 15 17079487 17083359 PCT