Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02200 ATGGCTGCAGAATCATACGAAGAAACCATCGCAACACTCACCAGACTTCTCCAGGAGAAAGCTGAACTTGGTGGCATCGCCGCCGTTAAGATAAAGGAGCTGACAGCGGAGTTACAGGCGAAAGGTTCGAAACCGTTTAACCCGGATGAGAGGATCCGATCCGGTTTTGTTCATTTCAAAACAGAGAAATTCGAGAAAAATCCTGATCTGTACGGTGAACTAGCCAAAGGCCAGAGCCCAAAGTTTATGGTTTTTGCTTGCTCAGACTCTAGAGTTTGTCCCTCCCACATTTTGGATTTCCAACCGGGTGAAGCTTTTGTTGTTCGAAACATCGCTAACATGGTTCCACCATATGATAAGACCAAGTATTCGGGAGCAGGGGCGGCCATTGAATATGCGGTCTTACATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGCTGCTGTGGAGGTATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACCGCAAGTGACTTCATAGAACAATGGGTCCAAATATGTAATCCAGCAAAGTCCAAGGTTAAAGCGGACACAAGCAGCTTAAGCTTTTCAGAGCAGTGTACAAACTGCGAAAAGGAAGCTGTGAATGTATCACTTGGGAACTTATTGACTTATCCATTTGTGAGAGATGGAGTTGTGAAGAAAACACTTGCTTTGAAAGGAGCACATTACAATTTTGTTAATGGCACTTTTGAGCTGTGGGATTTGAATTTCAACCTTTTGCCATCTATATCCATTTAA 771 0.4371 MAAESYEETIATLTRLLQEKAELGGIAAVKIKELTAELQAKGSKPFNPDERIRSGFVHFKTEKFEKNPDLYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPAKSKVKADTSSLSFSEQCTNCEKEAVNVSLGNLLTYPFVRDGVVKKTLALKGAHYNFVNGTFELWDLNFNLLPSISI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02200 256 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Trre9g02200 256 Coils Coil 3 23 - -
Trre9g02200 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Trre9g02200 256 SUPERFAMILY beta-carbonic anhydrase, cab 50 253 IPR036874 GO:0004089|GO:0008270
Trre9g02200 256 FunFam Carbonic anhydrase 37 256 - -
Trre9g02200 256 PANTHER CARBONIC ANHYDRASE 39 247 IPR001765 GO:0004089|GO:0008270
Trre9g02200 256 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Trre9g02200 256 Gene3D Carbonic anhydrase 40 256 IPR036874 GO:0004089|GO:0008270
Trre9g02200 256 Pfam Carbonic anhydrase 83 240 IPR001765 GO:0004089|GO:0008270
Trre9g02200 256 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02200 Trre-Chr9 23751932 23759064 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02200 K01673 - gmx:100810496 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02200 9 23751932 23759064 Trre9g02200 9 23751932 23759064 ECH
Trre9g02200 9 23751932 23759064 Trre15g02047 15 16585017 16591208 PCT