LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g02047	ATGGCAGGAGGAGATGAGTCATATGAGGAAGCTATTGCAGAATTGAGGAAGCTTCTAAGTGAGAAAGCTGACCTTGGAGATGTCGCTGCTGCAAAGATCAAGCAATTGACGACTGAGTTGGTCGCTATTGGGTCGGATTCTTTTAAGCCGGATGAGAGAATTCGAAATGGCTTCCACTTTTTCAAGAATGAAAAATTTCAGAAAAATCCAGAGTTGTATGGTGAACTTGCTAAAGGCCAGAGCCCAAAGTTTCTGGTTTTCGCTTGCTCGGACTCGAGAGTTTGCCCATCCCATGTTCTTGATTTTCAACCTGGTGAAGCCTTTGTGGTCCGAAACATTGCCAATATGGTTCCACCATATGACAAGAGCAAATATTCAGGAACAGGGGCTGCTATTGAATATGCTGTCTTACATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGCTGCTGTGGAGGTATAAAGGGTCTCATGTCCATCCCAGATGATGGGACCACTGCAAGTGACTTCATAGAGCAATGGGTTCAAATTTGTAATCCAGCAAAGTCCAAAGTTAAAGAAGAAACAAGCAAATTAGATTTCTCTGAGCAGTGTACCAACTTGGAGAAGGAAGCTGTTAATGTATCTCTTGGGAACTTACTGACTTATCCATTTGTGAGAGATGCTGTTGTGAAGAAAACCATAGCTTTGAAAGGAGCACATTATGATTTTGTTAAGGGGGCATTTGAGTTATGGGATGTAGACTTCAAAATTTCACCCTCAGTGTCCTTTTAA	777	0.417	MAGGDESYEEAIAELRKLLSEKADLGDVAAAKIKQLTTELVAIGSDSFKPDERIRNGFHFFKNEKFQKNPELYGELAKGQSPKFLVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKSKYSGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPAKSKVKEETSKLDFSEQCTNLEKEAVNVSLGNLLTYPFVRDAVVKKTIALKGAHYDFVKGAFELWDVDFKISPSVSF	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g02047	258	CDD	beta_CA_cladeB	57	246	IPR045066	GO:0004089\|GO:0008270
	Trre15g02047	258	Pfam	Carbonic anhydrase	85	242	IPR001765	GO:0004089\|GO:0008270
	Trre15g02047	258	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	133	153	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Trre15g02047	258	PANTHER	CARBONIC ANHYDRASE	41	250	IPR001765	GO:0004089\|GO:0008270
	Trre15g02047	258	SMART	Pro_CA_2	77	247	IPR001765	GO:0004089\|GO:0008270
	Trre15g02047	258	FunFam	Carbonic anhydrase	40	258	-	-
	Trre15g02047	258	SUPERFAMILY	beta-carbonic anhydrase, cab	52	253	IPR036874	GO:0004089\|GO:0008270
	Trre15g02047	258	Gene3D	Carbonic anhydrase	46	258	IPR036874	GO:0004089\|GO:0008270
	Trre15g02047	258	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	89	96	IPR015892	GO:0004089\|GO:0008270\|GO:0015976

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g02047	Trre-Chr15	16585017	16591208	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g02047	K01673		-	gmx:100808326	435.647

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre9g02200	9	23751932	23759064	Trre15g02047	15	16585017	16591208	PCT