Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01594 ATGGCTTTTAACAACAAATTTAAGAAGACTAATTCACCTTCACATTTCAATTTCTGCTACACCCTTTTCATCATTTCTTTCTTCACAATACCAACTTTTTTCCTTCTCAATAATTTCACCACAAACTCCAAATGCACCAACCTTACCAAAAACTTTTCAGGTAATCTTCTATCAGCTGAGTTTGCATGGAACAGCCTCTCATTTTTACAACATAGCCCTTCACCTGTAGTTCTCAAAATTGCAGTCTTTTCTAGAAAATGGCCTAGCGGAACCGTTCCCGGTGGCATGGAACGCCATGCTCACACCCTTCATACCTCGTTAGCTCGCCGCGGACATCAAGTTCATGTCTTCACTTCCCCTTCAGAAGATGAAACGGCAACAACAGCTTCAATCTCGTCAAAAGGTTCGCCTTCATCACCTTACATTCATTATCACGAAGGCGAGCCAGGTAAGTGGCGTTACAACAAAGCATGGGAACTTTTTCTCGAAGAAAACCAAAGAGACCAACCTTTTGATGTTGTTCATTCAGAAAGTGTAGCACTTCCTCATTGGCTAGCAAAAGAGCTTCCAAATCTTGTCGTATCATGGCACGGCATAGCGTTAGAAAGCTTGCAATCAAGCCTTTTTCAGGACTTGGCTCGTCTTCCAGACGAGCCAAGATCACAAGATTTTGAAAAACGATTACAAGGAGTTGTTCCTAAGGTTCTCAATGAGATAAGATTCTTCCACAAATACTCTCATCATGTTGCTATCAGTGATAGTTGCGGCGAGATGTTAAGAGATGTTTACCAAATTCCAAGTAGAAGAGTTCATGTGATCCTCAATGGTGTCGATGAGGACGATTTCAGAGAAGATGTTGAATTAGGAAAAGAGTTTAGAACCAAAATTGGTATTCCAAGTAATGCTAGTTTAGTATTTGGAGTAGCCGGAAGATTAGTGAAAGATAAAGGTCATCCACTACTTCATGAAGCATTTTCGCGGCTTATAACAAAACACACCAACGTGTATCTGATTGTAGCAGGTTCTGGACCATGGGAGAATAGGTACAAAGATTTAGGGAACCAAGTTCTTGTTCTTGGATCAATGAATCCTTCTATGTTAAGAGCATTTTATAATGCTATTGATATTTTTGTTAATCCTACATTAAGACCACAAGGGCTTGACCTTACACTTATGGAAGCCATGATGATTGGAAAGCCACTTTTGGCATCAAGGTTTCCAAGTATTAAAGGAAGTATTATTGTTGATGATGAATTTGGTTATATGTTTTCTCCAAATGTGGAATCACTTTTGGAAGCACTTAAAGAAGTTGTAAAGGATGGTAAAGAGAGGCTAGAAAAGAGAGGAAATGCTTGTCGCGAATACGCAAATTCTATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGACTGTTTTTATGCATAAAAAGGCATACATTTTGTACCTACCCTTGA 1458 0.3923 MAFNNKFKKTNSPSHFNFCYTLFIISFFTIPTFFLLNNFTTNSKCTNLTKNFSGNLLSAEFAWNSLSFLQHSPSPVVLKIAVFSRKWPSGTVPGGMERHAHTLHTSLARRGHQVHVFTSPSEDETATTASISSKGSPSSPYIHYHEGEPGKWRYNKAWELFLEENQRDQPFDVVHSESVALPHWLAKELPNLVVSWHGIALESLQSSLFQDLARLPDEPRSQDFEKRLQGVVPKVLNEIRFFHKYSHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEDDFREDVELGKEFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKHTNVYLIVAGSGPWENRYKDLGNQVLVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMIGKPLLASRFPSIKGSIIVDDEFGYMFSPNVESLLEALKEVVKDGKERLEKRGNACREYANSMFTARKMALAYERLFLCIKRHTFCTYP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01594 485 CDD GT4_PimA-like 79 473 - -
Trre9g01594 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 79 473 - -
Trre9g01594 485 Gene3D Glycogen Phosphorylase B; 78 285 - -
Trre9g01594 485 PANTHER GLYCOSYLTRANSFERASE 12 485 - -
Trre9g01594 485 Gene3D Glycogen Phosphorylase B; 286 474 - -
Trre9g01594 485 MobiDBLite consensus disorder prediction 118 139 - -
Trre9g01594 485 MobiDBLite consensus disorder prediction 118 140 - -
Trre9g01594 485 Pfam Glycosyl transferases group 1 304 447 IPR001296 GO:0016757
Trre9g01594 485 Pfam Glycosyltransferase Family 4 94 280 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01594 Trre-Chr9 13954080 13955537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01594 1 485 Glycosyltransferase AT4G19460 62.097 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01594 - - gmx:100817087 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01594 9 13954080 13955537 Trre9g01594 9 13954080 13955537 ECH
Trre9g01594 9 13954080 13955537 Trre15g02431 15 20190732 20192198 PCT