Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02431 ATGCACACATCTTCAGAATTCCAAGAAGAGGAAATGGCCTTAAACAATAAAACCAAGAAACCCATTTCCCCTTCAAATTTTTATTTCTTCACAACCCTTTTCTTCATTGTCATCTTCACTATACCTGCTCTTTTTCTTCTTCACACCCCCACCACAACTTCTATTTGCACCTCCTCCCACCAATCAAAAACTTGGTCAGGTGATCTTACTTTAGCTGAATTTGCATGGAATAAACTATCATTTTTTCCACACAAAAAACCATTTTTACCTCTAAAAATTGCTGTTTTCACAAGAAAATGGCCTATTGGTACAACCCCAGGTGGCATGGAACGCCATGCTTACACCCTTCATACTGCTTTAGCTCAAAGAGGACATAAAGTTCACATTTTTACATCACCCCAAGATATAAAAACTTCAATCAAAGGTAACCCTTTTATTCATTTTCATGAAGGTGAATTTGGAAAATGGAGATACAATAAAGCATTGGAACAATTTCAGGAAGAGAACAAAATTGAACCTTTTGATGTTATTCATTCAGAAAGTGTTGCACTTCCTCATTATGTAGCTAGGGACCTTTCAAATCTTGCAGTGTCTTGGCATGGAATAGCACTTGAGAGTTTGCAATCGAGTATTTTTCAGGATTTAGCTAGAAGATCTGATGAGCCTATTTCACCTCTTTTTAATAATAGTTTGCAGGGTATTGTTCCTAAGGTTCTTAATGAGATAAGATTTTTCCAAAGTTATGCTCATCATGTTGCTATTAGTGATAGTTGTGGTGAAATGCTAAGAGATTTCTACCAAATTCCTACAAGAAGAGTTCATGTGATTGTTAATGGGGTTGATGAGGATGATTTTGGTGAAGATATTGAATTAGGAAGGGAATTTAGAACACAAATTGGGATTCCAAGGAATGCAAGTTTGGTACTTGGTGTAGCCGGGCGATTAGTTAAAGATAAAGGTCATCCTTTGCTTCATGAAGCATATTCTAGGCTAATAACAAAACATCCTAATGTGTATTTGATAATTGCTGGTTCTGGACCATGGGGGAACAGGTACAAGGATTTAGGAAACCAGGTTCTTGTTTTGGGATCAATGAGTCCTACCATGTTGAGAGGATTTTATAATGCTGTTGACATTTTTGTGAATCCAACACTTAGGCCACAAGGGCTTGATCTTACTTTGATGGAAGCTATGATGAGTGGGAAGCCACTTTTAGCATCAAGGTTTCCAAGCATTAAAGGTACTCTTTTGGTTGATGATGAGTATGGTTTCATGTTCTCTCCTAATGTAGAGTCTTTGCTTGAGGCACTTGAAGCAGTGGTCAAGGAAGGACCACAGAGGCTAGCAAGGAGAGGAAAGGCTTGTAGGGAATATGCTGCATCAATGTTTACAGCAAAAAAGATGGCATTAGCATATGAGAGGTTATTTCTATGTATAAAAGATCCTACATTTTGTATCTACCCTTAA 1467 0.3749 MHTSSEFQEEEMALNNKTKKPISPSNFYFFTTLFFIVIFTIPALFLLHTPTTTSICTSSHQSKTWSGDLTLAEFAWNKLSFFPHKKPFLPLKIAVFTRKWPIGTTPGGMERHAYTLHTALAQRGHKVHIFTSPQDIKTSIKGNPFIHFHEGEFGKWRYNKALEQFQEENKIEPFDVIHSESVALPHYVARDLSNLAVSWHGIALESLQSSIFQDLARRSDEPISPLFNNSLQGIVPKVLNEIRFFQSYAHHVAISDSCGEMLRDFYQIPTRRVHVIVNGVDEDDFGEDIELGREFRTQIGIPRNASLVLGVAGRLVKDKGHPLLHEAYSRLITKHPNVYLIIAGSGPWGNRYKDLGNQVLVLGSMSPTMLRGFYNAVDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGTLLVDDEYGFMFSPNVESLLEALEAVVKEGPQRLARRGKACREYAASMFTAKKMALAYERLFLCIKDPTFCIYP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02431 488 Gene3D Glycogen Phosphorylase B; 290 459 - -
Trre15g02431 488 Pfam Glycosyl transferases group 1 308 453 IPR001296 GO:0016757
Trre15g02431 488 Pfam Glycosyltransferase Family 4 107 283 IPR028098 -
Trre15g02431 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 105 476 - -
Trre15g02431 488 CDD GT4_PimA-like 92 476 - -
Trre15g02431 488 Gene3D Glycogen Phosphorylase B; 91 289 - -
Trre15g02431 488 PANTHER GLYCOSYLTRANSFERASE 27 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02431 Trre-Chr15 20190732 20192198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02431 8 488 Glycosyltransferase AT4G19460 61.924 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02431 - - aprc:113860121 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02431 15 20190732 20192198 Trre15g02431 15 20190732 20192198 ECH
Trre9g01594 9 13954080 13955537 Trre15g02431 15 20190732 20192198 PCT