Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01517 ATGGAGAATAGTAATAGTGAAAGCCAAATAAAAAGTAGTAGCTTTAGAAAGGGTAGCTTTAGAAAGGGCAGCTTTAGATTGGGAGGAAAAGATCAAACAGTGATTGAGTTAGGTAGTTTTGATACTCAAAGACTACTCTTAGAAGGTGGTGGTGGAGGAATAAGAGAGAAACAAAAACTTCCCAAAAATACTCTTTCTCTTAGGCAGATGAAATCACTCACTGCTCTTACAGACACCATCTTACCTTCTGTCAATGACTTTGTTCCCGTCTCGGCCGACGACGAATCCGCCGCCACTTTCTACCGCATTTCAGCTTCCATGGCTGGAACACCTGAGCGTCTTGGGGGTATAATAAGTGAGAAATTAATTCATCCAATGACATGGTTATTACATTTGGTATTGTGGTTTCTTTCTACATGGATTGGAACAATAATTTTATGTGGCATGGGTTGCTTATCCACCAAGTTCCCTTTTATTCACACTTTCCCTGATTTGCCTCTTCACAAACGCCAACAAATTTTGCAAACCATGTCTCTTAGTTTTTTTCGTCTCCTTAGAATGTTCTTCAAAACAATTAAAATTCTCACTCTCCGAGAGTTCTTCACTCAGTTAGATGAATCAGAAGACAATTGTTCATGGAAAGCAATTGGATACTATGGACCTGATCCAGAATTCAAAGCTCAGATAAAGAGACATTTTTTACATGGAACATCTAAAGTAGGACAAGATTCCGAGGAAGCCGGTGATGAAGCTGAACAGGCCATAGGACCTCTTTACAAAGGTCTCGTCCATCTCAACTATCCGCGAGACATCACAGTTGATGCTCTAAGGCGATTTGGATTCCCTGTCTCAGTTAATCGCCGAAAGCCAAAAGCTGCTGCTAACTTGTCATCACCTTCTTTAGTTATACAATGTGATGCTGTGGTAGTTGGTTCCGGCTCAGGAGGTGGAGTGGTAGCTGGAATTCTAGCAAAAGCTGGTTACAAAGTGTTGGTTTTGGAGAAAGGAGGCTATTCTGCTAGGAACAATCTTTCACTTCTTGAAGGACCAACCATGGATCAAATGTATGAAACTGGTGGTTTGGTAGCAACAGTTGATATGAGTGTACTTATATTGGCAGGATCAACTGTTGGTGGAGGGTCTGCAATCAATTGGGGTGCATCCATCAAAACACCTCAGCATGTGTGCAAGGAGTGGTGTGAAAAACATGAGCTAGAATTGTTCGAAAGCGAATTGTATCGAGAAGCGATGGATGCCGTTTGCGAGAAAATGGGAGTTCAATCTGAGATAGAAGTGGAAGGTTTCAACAACGCGGTTTTGAGAAAAGGGTGTCAAGAAATGGGATATCCTGTGAATAACATTCCCAGGAATTCTTCGTCGGATCACTACTGTGGATGGTGTTGTTTGGGGTGTAAGGATGGAAAAAAGAAGGGTACGTCGGAAACATGGTTGGTGGACTTGGTGAAATCTGGCAATGGAGCGATTCTTCCTGGTTGCACGGCGATGAAAGTTTTGCATAAGAAAAAGAAGGGAACTGGTAAAAAGATCGCGCAAGGAGTGGCGTTTGAATTTGAATACAAAGGAAGTAAAGAAATTTGTGTGGTGGAATCCAAGGTCACAATTGTAGCAAGTGGAACACTCAATACTCCATCATTGCTTAAACGAAGCGGCTTAAAAAATAACAACATAGGGAGAAACTTGCATCTCCATCCGGTGGTAATGGCCTGGGGCTACTTCCCAGATGCACCAGCAGAACCTACAGGTGCATCTGAAGTGTGGCCCGAGGCATGGAAAAAGAGCTACGAAGGAGGGATAATGACAGCAATGTCACCTGTTGTTGCAGAGTTTGACAAATCAGGATACGGTGCAGTGATCCAAACGCCTGCATTGCATCCTGGTACATTCTCGATTGTCATGCCATGGGTTTCTGGAAGCGATATAAAAGATAGAATGCGAAAGTTTTCAAGAACAGCGCATATATTTGCATTGGCAAGGGATCAAGGATCGGGAAAAGTGATTTCGCCAAGTCATATAAGTTATCAAATGAAAGATAGTGATGAAGAGAATTTACAGAAGGGAATTGATAAGGTACTGAGAATTCTAGCTGCAGCCGGCGCCGAAGAAATTGGAACTCATCATAACAAGGGAAATACCTTAAATGTAAAGCAGGCGAGTTATCATGAATTTGAGAAATTTGTTAAAGAGGAAAGTTCAAGGTCATTGACAGACCTTTCGACGCAGTTATGCTCGGCACATCAGATGGGGAGTTGTCGGATGGGATCTAATCCAAAGGAATCGGTGGTGAAGCAGACAGGAGAGACATGGGAAGTAGAAGATCTTTATGTAGCGGATGCGAGCGTCTTCCCTACAGCTTTGGGTGTGAATCCAATGATAACTGTTCAATCAATTGCTTACTGCACTGCACAATCTGTTCTTCAAGTTCTTAAAAGGAAAAGAAGTAAATAA 2466 0.423 MENSNSESQIKSSSFRKGSFRKGSFRLGGKDQTVIELGSFDTQRLLLEGGGGGIREKQKLPKNTLSLRQMKSLTALTDTILPSVNDFVPVSADDESAATFYRISASMAGTPERLGGIISEKLIHPMTWLLHLVLWFLSTWIGTIILCGMGCLSTKFPFIHTFPDLPLHKRQQILQTMSLSFFRLLRMFFKTIKILTLREFFTQLDESEDNCSWKAIGYYGPDPEFKAQIKRHFLHGTSKVGQDSEEAGDEAEQAIGPLYKGLVHLNYPRDITVDALRRFGFPVSVNRRKPKAAANLSSPSLVIQCDAVVVGSGSGGGVVAGILAKAGYKVLVLEKGGYSARNNLSLLEGPTMDQMYETGGLVATVDMSVLILAGSTVGGGSAINWGASIKTPQHVCKEWCEKHELELFESELYREAMDAVCEKMGVQSEIEVEGFNNAVLRKGCQEMGYPVNNIPRNSSSDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILPGCTAMKVLHKKKKGTGKKIAQGVAFEFEYKGSKEICVVESKVTIVASGTLNTPSLLKRSGLKNNNIGRNLHLHPVVMAWGYFPDAPAEPTGASEVWPEAWKKSYEGGIMTAMSPVVAEFDKSGYGAVIQTPALHPGTFSIVMPWVSGSDIKDRMRKFSRTAHIFALARDQGSGKVISPSHISYQMKDSDEENLQKGIDKVLRILAAAGAEEIGTHHNKGNTLNVKQASYHEFEKFVKEESSRSLTDLSTQLCSAHQMGSCRMGSNPKESVVKQTGETWEVEDLYVADASVFPTALGVNPMITVQSIAYCTAQSVLQVLKRKRSK 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01517 821 Gene3D - 736 819 IPR036188 -
Trre9g01517 821 Gene3D - 291 615 IPR036188 -
Trre9g01517 821 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 62 820 - -
Trre9g01517 821 Pfam GMC oxidoreductase 677 806 IPR007867 GO:0016614
Trre9g01517 821 Pfam GMC oxidoreductase 306 572 IPR000172 GO:0016614|GO:0050660
Trre9g01517 821 PIRSF Lg_Ch_AO 54 821 IPR012400 GO:0046577
Trre9g01517 821 SUPERFAMILY FAD/NAD(P)-binding domain 303 816 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01517 Trre-Chr9 13046256 13056742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01517 30 815 Acyl Lipid Metabolism Gene Families AT4G19380 56.980 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01517 K17756 - gmx:100779139 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01517 9 13046256 13056742 Trre9g01517 9 13046256 13056742 ECH
Trre9g01517 9 13046256 13056742 Trre15g02450 15 20346203 20352891 PCT