Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02450 ATGAATGAAGCAAAAGTGCACACTGTTGTTGAGCTTGGTGGGTTTGACACAAAGAGTCTTCTTTGTGATGTTGTTGATTTTGAAGAGAGTGAAAAACAACAACAACAGCAGAAAAAGCAATTACCTCTTAAAAATTCTCTATCTCCTAGACAAATGAAATCCCTAGTTGCTCTTTGTGATACTATTTTACCCTCCATCATAGACAACAAGGTTGTTTCTTCCTCTGATGAATCTGTCAACAACTTCTACCGTACTTCTGCTTCCATGGCTGGCACACCTGAACGTGTTGCAAATTTGGTGAGTGAAAAATTGAATCACCCAAGTACGAAGTTATTTACATTGACATTATGGCTACTATCAACATGGTTTGGTACATTGATACTGTGTGGTATAGCAAGTCTCTCAACAAAATTCCCCTTCTTCCTAAGCTTCCCCGAGTTGTCTTCAGAAAAACGCCAAAAAATAATACAGTCTTGGTCAACCAGTTGTCTTCGTCTCCTCAAAATGTTATTCAGAACCATAAAGCTTCTCACACTCTTAGTCTTCTTTACTCAAGTAGATGAAGAAGAAAATAACCCATCATGGAAGGCAATTGGATATAGTGGACCTGATCCAGAGTTCAAAGCTCAGCAGAAGAACAAAAGTTTACACAAAACATCCAAAGAAGGAGAAAAAGAAGATGATGAAGAGGTTTTAGGACCTCTTTACAAAGGTCTTGTCCATCTGAACTACCCGCGTGATATAATTTCGGATTCTCTAAGGCGATTCGGATTCCCTGTATCTGTGACTCCACCAACAAATAAAGCTTCTACCATCTCATCTCCTTCTCTAGTTATCCAATGTGATGCAGTAGTTGTTGGTTCTGGCTCAGGAGGTGGAGTGGTAGCAGGAGTTCTAGCAAAAAGTGGTTATAAAGTGTTGGTATTGGAAAAAGGAAACTATTTTGCTAGGAAAAATCTTTCGCTTCTTGAAGGACCATCCCTAGATCAAATGTACCTATCTAATGGTTTGCTAGCAACAGATGATATGTCAGTACTAGTATTAGCAGGTTCCACAGTTGGTGGAGGGTCTACAATCAACTGGTCAGCTAGCATCAAAACTCCTAACCATGTATGCAAGGAGTGGTGCGATCGGCATGAGCTAGAATTGTTTGAAAGTAAATTATACAAAGAAGCAATGGATGTTGTGTGCGAGAAAATGGGAGTCCAATCTGATTTTGACGAGGAAGGATTTAATAATGCAATACTAAGAAAAGGGTGTCATGAAATGGGGTATCCTGTTAATAACATTCCTAGGAATGCTCCACCAGATCACTACTGTGGTTGGTGTTTTATGGGATGTAAGGATGGAAAGAAGAAGGGTACATCAGAGACATGGCTTGTAGACTTGGTGAAATCGGGTAACGGAGCAATTCTTCCTGGCTGTGAGGCTATACAAATCTTACACGGAGAAAAGAAAGGAAGAGACAAAAAAATAGCAAAAGGAGTGGCTTTTGCAATTGACTACAAGGGAAAAAAAGAAATTTGTGTAGTCGAGTCTAAGGTCACAATTGTAGCCTGTGGCGCACTAAGTACTCCGCCGTTACTCAAAAGAAGTGGTTTGAAAAATGAAAACATAGGGAGAAACTTGCATCTTCATCCGGTGACAATGGCTTGGGGCTACTTCCCTGATGCACCTGAGTTGTGGCCGGAGGAACGTAAAAAAAGCTATGAAGGAGGGATTATGACAGCAATGTCTACAGTTGTTGCAGACTTTAACAGATCTGGATATGGTGCGGTGATCCAAACACCTTCATTGCATCCAGGCTTATTCTCGATTCTAATGCCATGGAGTTCTGGAATGGATATAAAAGATCGAATGCGCAAGTTTTCAAGGACAGCTCATATATTTGCACTGGCAAGGGATCAAGGATCGGGAACTGTGGTGGATTCACCTAACTGTATAAGTTATCAGATGAAAGATATAGACAAAGATAATTTAAGCAAAGGAATTGAGAAGGTGCTTAGAATATTGGCAGCAGCCGGAGCCGAAGAAATCGGGACACATAATAGCAAGGGAAGGAGCTTAAAGGTTAAGGAAGTGAGCTATCATGAATTTGAGAAATTTGTTAAGGAAGAAAGTTCAATGTCATTTACTGACCTTTCAACACCAGTATGCTCGGCACATCAGATGGGGAGCTGTCGAATGGGTACTAACTCGAAGGAATCAGTTGTGAACCAAATGGGGGAAACATGGGAAGTTGAGGGTCTTTATCTTGCTGATTCAAGTGTTTTTCCCACAGCTTTGGGTGTGAATCCAATGGTCACAATTCAAGCTATTGCATATTGCACGGCGCAACATGTTCTTGAAGTTCTCAAAAGAAAAAAATGA 2370 0.4059 MNEAKVHTVVELGGFDTKSLLCDVVDFEESEKQQQQQKKQLPLKNSLSPRQMKSLVALCDTILPSIIDNKVVSSSDESVNNFYRTSASMAGTPERVANLVSEKLNHPSTKLFTLTLWLLSTWFGTLILCGIASLSTKFPFFLSFPELSSEKRQKIIQSWSTSCLRLLKMLFRTIKLLTLLVFFTQVDEEENNPSWKAIGYSGPDPEFKAQQKNKSLHKTSKEGEKEDDEEVLGPLYKGLVHLNYPRDIISDSLRRFGFPVSVTPPTNKASTISSPSLVIQCDAVVVGSGSGGGVVAGVLAKSGYKVLVLEKGNYFARKNLSLLEGPSLDQMYLSNGLLATDDMSVLVLAGSTVGGGSTINWSASIKTPNHVCKEWCDRHELELFESKLYKEAMDVVCEKMGVQSDFDEEGFNNAILRKGCHEMGYPVNNIPRNAPPDHYCGWCFMGCKDGKKKGTSETWLVDLVKSGNGAILPGCEAIQILHGEKKGRDKKIAKGVAFAIDYKGKKEICVVESKVTIVACGALSTPPLLKRSGLKNENIGRNLHLHPVTMAWGYFPDAPELWPEERKKSYEGGIMTAMSTVVADFNRSGYGAVIQTPSLHPGLFSILMPWSSGMDIKDRMRKFSRTAHIFALARDQGSGTVVDSPNCISYQMKDIDKDNLSKGIEKVLRILAAAGAEEIGTHNSKGRSLKVKEVSYHEFEKFVKEESSMSFTDLSTPVCSAHQMGSCRMGTNSKESVVNQMGETWEVEGLYLADSSVFPTALGVNPMVTIQAIAYCTAQHVLEVLKRKK 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02450 789 Gene3D - 709 789 IPR036188 -
Trre15g02450 789 Pfam GMC oxidoreductase 282 548 IPR000172 GO:0016614|GO:0050660
Trre15g02450 789 PIRSF Lg_Ch_AO 32 789 IPR012400 GO:0046577
Trre15g02450 789 Gene3D - 267 594 IPR036188 -
Trre15g02450 789 MobiDBLite consensus disorder prediction 194 229 - -
Trre15g02450 789 MobiDBLite consensus disorder prediction 210 229 - -
Trre15g02450 789 Pfam GMC oxidoreductase 649 776 IPR007867 GO:0016614
Trre15g02450 789 SUPERFAMILY FAD/NAD(P)-binding domain 279 783 IPR036188 -
Trre15g02450 789 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 44 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02450 Trre-Chr15 20346203 20352891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02450 25 785 Acyl Lipid Metabolism Gene Families AT4G19380 59.711 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02450 K17756 - gmx:100778208 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02450 15 20346203 20352891 Trre15g02450 15 20346203 20352891 ECH
Trre9g01517 9 13046256 13056742 Trre15g02450 15 20346203 20352891 PCT