Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01460 ATGCCGACGGAGAAAATCTTCAACGGAAGAGAACAATTCACCGATACTTCAAACACGTTCAGTTCAATTCTAGCATTATCATTATGGCTTGGATCGATTCACTTCAACATCGCATTAATCCTCTTCGCTTTATTCTTCCTTCCTTTCTCCAAATCTCTCGTGGTTTTAGGGTTTCTGTTTTTGTGCATGGTGCTTCCAGTGGAAGCTAAGAGCAAATTTGGAAGAAGATTGTCTAGGTACATATGCAAGCATGCTTGTAGTTACTTTCCCATCACGCTTCATGTAGAGGATATAAAAGCCTTTGATCCCAATCGTGCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGCGTTATTGCACTAGCTGACCACACAGGTTTCATGCCTATTCCAAAAGTTAAAGTTCTTGCTAGCAGTGCGGTGTTCTACACACCATTTTTAAGACACATATGGACATGGTTGGGTCTTTCACCAGCAACCAGGAAAAATTTTATCTCCCTGTTAGCTGATGGCTATAGTTGCATTTTAATACCTGGTGGAGTTCAAGAGACATTTCTCATGCAGCATGATTCTGAGATTGCTTACCTTAAAGCAAGAAGAGGTTTTGTTCGCATAGCAATGGAGAAAGGCCATCCATTGGTTCCAGCTTTCTGCTTTGGTCAGTCAGATATCTATAAGTGGTGGAAACCAGGTGGAAAGTTCTTTCTGAACTTCTCGAGGGCTATCAAGTTCACTCCTATATGTTTTTGGGGTATTTTCGGATCCCCGGTACCGTTCAGACATCCAATGCATGTGGTGGTGGGTAGGCCAATTGAGCTAGAGAAAAATCCAGAACCAACCACAGAGGAGGTTGCCAGGATACATAGTCAGTTTGTGGAAGCGCTTCAAGATCTCTTCGAAAGGCACAAAGCTCAAGCTGGCTATCCAAACCTCGAGTTAAAAATTGTTTGA 960 0.4208 MPTEKIFNGREQFTDTSNTFSSILALSLWLGSIHFNIALILFALFFLPFSKSLVVLGFLFLCMVLPVEAKSKFGRRLSRYICKHACSYFPITLHVEDIKAFDPNRAYVFGYEPHSVLPIGVIALADHTGFMPIPKVKVLASSAVFYTPFLRHIWTWLGLSPATRKNFISLLADGYSCILIPGGVQETFLMQHDSEIAYLKARRGFVRIAMEKGHPLVPAFCFGQSDIYKWWKPGGKFFLNFSRAIKFTPICFWGIFGSPVPFRHPMHVVVGRPIELEKNPEPTTEEVARIHSQFVEALQDLFERHKAQAGYPNLELKIV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01460 319 CDD LPLAT_MGAT-like 102 307 - -
Trre9g01460 319 Pfam Diacylglycerol acyltransferase 44 312 IPR007130 GO:0008374
Trre9g01460 319 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 135 303 - -
Trre9g01460 319 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 21 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01460 Trre-Chr9 12444628 12449176 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01460 8 319 Acyl Lipid Metabolism Gene Families AT3G51520 67.516 1.08e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01460 K22848 - gmx:100784657 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01460 9 12444628 12449176 Trre9g01460 9 12444628 12449176 ECH
Trre9g01460 9 12444628 12449176 Trre15g02468 15 20580443 20585508 PCT