Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02468 ATGGAAACGTCACCGGAGAAGAAAGTGTTCGTTGGGAGCGATAAATTCGCCGATTCTTCATCCAATAGTTTCAACACTTTTCTTTCTCTCTCATTATGGCTTGGAGCTATTCATTTCAATGGAGCAGTTATTTTCTTTGCTCTCTTTTTTCTTCCTTTCTCCAAATCACTCTTGGTTTTTGGTTTACTTTTCGTGTTAATGGTGATTCCTATTGATGAAAAGAGCTTATACGGTCGAAAATTAGCCAGGTATATATGTAAGCATGCTTGTAGTTACTTTCCTGTCACGCTTCATGTAGAGGATATTAAGGCTTTCCATCCAAATCGTGCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGAGTTGTTGCGCTAGACGACAGCACAGGTTTTATGCCTCTTCCGAAAATAAAAGTTCTTGCGAGCAGTGCAATATTTTACACACCATTTTTGAGACACATATGGACATGGTTGGGTCTGACACCAGCGTCAAGAAAAAACTTTACCTCCTTGCTGGATTCAGGCTATAGTTGCATCTTAGTTCCAGGTGGAGTTCAAGAAACATTTTTCATGGAGCACGGTAGTGAGATTGCGTTTCTCAAGACAAGAAGAGGATTTGTCCGTATAGCAATGGAGAAGGGGAAACCCCTGGTTCCAGTTTTCTGCTTTGGACAGTCAGATGTCTATAAGTGGTGGAAACCAGGTGGGAAGCTGATTCTGAATGTCGCGAGGGCTATCAAGTTCACCCCGATATATTTTTGGGGAATTTTCGGGTCTCCAATACCATTCAAACATCCCATGAATGTGGTGGTGGGTAGACCAATTGAGCTTGAGAAAAATCCGAAACCGACGCCTGAGGAGGTTGTTAAAGTACATAGTCAGTTTGTTGAAGCACTTCAAGATCTTTTTGAACGAAACAAAGCTCGAGTTGGATATCCGAACCTTCAGTTGAAAATTGTTTGA 972 0.4115 METSPEKKVFVGSDKFADSSSNSFNTFLSLSLWLGAIHFNGAVIFFALFFLPFSKSLLVFGLLFVLMVIPIDEKSLYGRKLARYICKHACSYFPVTLHVEDIKAFHPNRAYVFGYEPHSVLPIGVVALDDSTGFMPLPKIKVLASSAIFYTPFLRHIWTWLGLTPASRKNFTSLLDSGYSCILVPGGVQETFFMEHGSEIAFLKTRRGFVRIAMEKGKPLVPVFCFGQSDVYKWWKPGGKLILNVARAIKFTPIYFWGIFGSPIPFKHPMNVVVGRPIELEKNPKPTPEEVVKVHSQFVEALQDLFERNKARVGYPNLQLKIV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02468 323 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 139 291 - -
Trre15g02468 323 CDD LPLAT_MGAT-like 92 311 - -
Trre15g02468 323 Pfam Diacylglycerol acyltransferase 48 317 IPR007130 GO:0008374
Trre15g02468 323 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 26 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02468 Trre-Chr15 20580443 20585508 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02468 12 323 Acyl Lipid Metabolism Gene Families AT3G51520 70.927 6.37e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02468 K22848 - gmx:100809628 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01460 9 12444628 12449176 Trre15g02468 15 20580443 20585508 PCT