Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01344 ATGGCAAGCAAGTACCATGTTCGATCAAACAGTTTTCCTTCACAATCTCATCCTAGCTCTACCAGAATAGAACAAGATCTCAACAAAATCAAGACATGGGAAGTCACATCAACATCCACATCAAATTCAATAACCAATGGCCTTTCCATGCTTGAAGATTTATATATTTCCTTGGAAGATCTTCTCAACATGGCATCAACACAAAACGCTATTTCTCACCATCAAGGTGAGAAATCTGTGGAAGAGTTGTTGGATGGTTCAGTTAAAATTTTGGATATATGTGGCATCACAAGGGATACCTTGTTACAAATTAAGGAAAATGTTCAAACACTTCACTCTTCTCTTAGAAGGAAAAAGGGAGATTCAAGCATCGAAAAAAGCGTAGCTGAATATAACTTCTTCACAAAAAAGATGAAGAAGAATGTCACAAAGTTGATCACATCTTTAAAACAAATGGAAAGTAAATTTGGAGCTTCCTCTCTTTTGAATCAAGATCAAGAATTTGTTTCTTTGATAAAAGTTCTTAGAGAGGTTATAGTGATGAACATTTCTATCTTTCAATCCATTTTATCTTTCTTGGTCGGATCTGCATCAAAGTCAAAGGCAACCAAATGGTTGAAAGTGGCAAAGTTGATGCATAAGAAGGTATCATGTGAAGAAAAGTTGGAGAATTTCAATGAGTTGCACTGTGTGGAAGCATCTTTGAGAACCCTTTTAAGAGAAGGTTCTGATGTTGCCAAGATGCAGGCTACACATGAAAAAATTAAGGCTTTGGAGAATGCAATCGAAATGATAGAAAATGGTTTGGAGAGTGTATTTAGGCGTTTGGTTAAAACTAGAGTCTCTCTTTTGAACATCATGACTCAATCTTAG 873 0.3585 MASKYHVRSNSFPSQSHPSSTRIEQDLNKIKTWEVTSTSTSNSITNGLSMLEDLYISLEDLLNMASTQNAISHHQGEKSVEELLDGSVKILDICGITRDTLLQIKENVQTLHSSLRRKKGDSSIEKSVAEYNFFTKKMKKNVTKLITSLKQMESKFGASSLLNQDQEFVSLIKVLREVIVMNISIFQSILSFLVGSASKSKATKWLKVAKLMHKKVSCEEKLENFNELHCVEASLRTLLREGSDVAKMQATHEKIKALENAIEMIENGLESVFRRLVKTRVSLLNIMTQS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01344 290 MobiDBLite consensus disorder prediction 1 23 - -
Trre9g01344 290 Coils Coil 248 275 - -
Trre9g01344 290 PANTHER OS06G0725500 PROTEIN 2 287 - -
Trre9g01344 290 Pfam Protein BPS1 47 286 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01344 Trre-Chr9 11449198 11450070 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01344 - - gmx:100802325 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01344 9 11449198 11450070 Trre9g01344 9 11449198 11450070 ECH
Trre9g01344 9 11449198 11450070 Trre15g02545 15 21413559 21414488 PCT
Trre15g02544 15 21404296 21405180 Trre9g01344 9 11449198 11450070 PCT