Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02544 ATGGCAAACAAATACCATGTTAGATCAATTAGTTTGCCATCTAGATCTCATCCTAGCACAATTAGAGTTGATGAGGATTTGAACAAGCTCAAGACTTGGGAAGGAACATCCACATCAACATCAACATCAAGGTCTATTCATAATGGTCTTTCCTTGCTTGAAAATTTATATATTTCATTGGAAGATCTTCTTAATATGACATCAACCCAACAAGTGATTTCTCACCATAGAGGTGAAAAATCCATTGAAGAAGTGTTGGATGGTTCTATGAGAATTTTGGACCTATGTGGCATCACTAGGGACACAATTCTTCAAATTAAGGAAAATGTTCAAGTACTTCATTCTTCTATTAGAAGAAGAAAATGTGATTCAAGTGTTGAAAAAAGTGTGGTGGAATACAAACACTTTACAAAAAAGATGAAGAAAAATGTCAACAAATTGATTAAATCTTTGAAGCATATAGATAGCAAATTTGGGGTGTCCTCAATTTTGGAACTTGATCATCACTTTTCTTCTATGATTAGAGTATATAGAGAAGTCATTGTAATGAACATGTCTATTTTTCAATTCATTTTGTCATTTTTAACTCCATCTTCATCAAAGTCAAAGTCAACCAAATGGTTATTTATGACCAAACTTATGCACAAGGGAGTTATAACATGTGAAGATCATAACTTAGAGATTAATGCTAATGAGTTGCAGTGTGTGGAAGGTGCTTTAAACACCCTTTTAATTGAAGGTACTAATGGAGAAAATTTGCATGCTACCCGTGAAAGATTGGAGGCTTTGGAGAATGTAATTGAAAGTGTTGAGAATGGATTGGAGAATTTATTTAGGCGTTTGATTAAATCTAGAGCCTCCCTCTTGAATATAATTTCCCAATAG 885 0.3345 MANKYHVRSISLPSRSHPSTIRVDEDLNKLKTWEGTSTSTSTSRSIHNGLSLLENLYISLEDLLNMTSTQQVISHHRGEKSIEEVLDGSMRILDLCGITRDTILQIKENVQVLHSSIRRRKCDSSVEKSVVEYKHFTKKMKKNVNKLIKSLKHIDSKFGVSSILELDHHFSSMIRVYREVIVMNMSIFQFILSFLTPSSSKSKSTKWLFMTKLMHKGVITCEDHNLEINANELQCVEGALNTLLIEGTNGENLHATRERLEALENVIESVENGLENLFRRLIKSRASLLNIISQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02544 294 Pfam Protein BPS1 49 291 IPR004320 GO:0048364|GO:0048367
Trre15g02544 294 Coils Coil 253 280 - -
Trre15g02544 294 PANTHER OS06G0725500 PROTEIN 2 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02544 Trre-Chr15 21404296 21405180 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02544 - - gmx:100811784 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02544 15 21404296 21405180 Trre15g02544 15 21404296 21405180 ECH
Trre9g01347 9 11464822 11465694 Trre15g02544 15 21404296 21405180 PCT
Trre15g02544 15 21404296 21405180 Trre9g01344 9 11449198 11450070 PCT