Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01240 ATGGCTACTCAAAACCCTAATCCAAGAAATTCACTCTACCCTCAAGTTATCGATTCCAACCCCGACGCTCCTTCTCAACTCCATCAAACCAATCCTTCAAATCTCTACCCTTCAATCGACTTCAATGATCTCGTTCAAAATCTCTTCCCCGACGACATCGCCGCCGGGAGCAATCCTACTTCGCCTTCTGCACCGCCGGAAATCACCGAAGAAGAAATACTCGTCAAGATCCCCGGTGCTATTCTCAACCTTATTGATAGAGAATACAGTGTCGAACTCGCTTCCGGTGACTTCACCGTCGTCCGTCTCCGTCAAGGTCAAAATTCCATCGCTGTCTATGCTCGTATCGCTGATGAGATCCAATGGCCTCTTGCAAAAGACGAAACCGCTGTCAAAGTCGATGACTCTCACTACTTTTTCTCATTCCGTGCACCTAAGGGTACCGATTCAGACGACGAAGAAGAAAATCGGAGTAAAAAGAACGAATTAAACTCCGATTTATTAAGCTATGGTTTAACGATTGCGTCGAAAGGTCAAGAGCGTTTGTTGAAGGAGCTAGATGTGGTTTTGGAGAATTGCAGTAGCTTTTCTGTGCAGAAGGTTTCGGAGAAGGCGAAGAAAGGAGAGGCATTAGATGGAACGTTGGCGAAGGAGGTTTCGCCGAAGGATTTGGAGTCGAAGAAGAAGAAGGAGGTAATGGAAGGACAATGTGCGGCGTATTGGACTACATTGGCTCCTAATGTAGAGGAATATAGTGGAAGTGCTGCAAGGTTGATAGCTTCGGGTTCTGGACATGTGATTAAGGGGATTTTGTGGTGTGGTGATGTGACTATGGATAGGTTGCAATGGGGGAATCAGGTTATGAAGAAAAGGTTGGCTTCGGGTTCGCATCCTTCTGAGATTAGTCCTCAAACCTTGAAGAGGATTAAAAGGGTCAAGAGAGTCACCAAAATGACAGAAAAAGTTGCAAATGGATTGCTCTCTGGAGTCGTGAAAGTGTCTGGATTTTTCACTAGTTCAGTGGTAAACTCGAAGGCTGGAAAGAAGTTTTTCAGCCTTTTACCAGGGGAAGTTGTGCTTGCATCATTGGATGGATTCAGTAAAGTGTGCGATGCTGTTGAAGTAGCCGGAAAAAATGTCATGTCAACGTCATCCACTGTGACAACTGAACTTGTCGACCACAGATATGGAGAACAAGCTGCACACGCTACAAGTCAAGGGCTTGATGCTGCTGGTCATGCTCTGGGTACTGCATGGGCTGCATTTAAGATCAGGAAGGCTATTAATCCTAAGAGTGTCCTCAAACCTACCACCCTGGCCAAAAATGCTGCTAAAGCTGCAGCTTCTGATTTTAAGTCAAGTAAGTCAAAGTCCAAGTCCAAGTAA 1386 0.456 MATQNPNPRNSLYPQVIDSNPDAPSQLHQTNPSNLYPSIDFNDLVQNLFPDDIAAGSNPTSPSAPPEITEEEILVKIPGAILNLIDREYSVELASGDFTVVRLRQGQNSIAVYARIADEIQWPLAKDETAVKVDDSHYFFSFRAPKGTDSDDEEENRSKKNELNSDLLSYGLTIASKGQERLLKELDVVLENCSSFSVQKVSEKAKKGEALDGTLAKEVSPKDLESKKKKEVMEGQCAAYWTTLAPNVEEYSGSAARLIASGSGHVIKGILWCGDVTMDRLQWGNQVMKKRLASGSHPSEISPQTLKRIKRVKRVTKMTEKVANGLLSGVVKVSGFFTSSVVNSKAGKKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAHATSQGLDAAGHALGTAWAAFKIRKAINPKSVLKPTTLAKNAAKAAASDFKSSKSKSKSK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01240 461 MobiDBLite consensus disorder prediction 1 33 - -
Trre9g01240 461 PANTHER SPARTIN 8 455 IPR045036 -
Trre9g01240 461 Pfam Senescence domain 258 445 IPR009686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01240 Trre-Chr9 10505828 10511593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01240 K19366 - gmx:100804971 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01240 9 10505828 10511593 Trre9g01240 9 10505828 10511593 ECH
Trre9g01240 9 10505828 10511593 Trre15g02639 15 22236927 22241119 PCT