Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02639 ATGGCTTCTCAAAATCCTAACCACAAAAATTCCCTTTACCCAGAGGTTATTGATTCAAATCCCGAAGCATCCTCACCCTTCATCTCTAACCCTAATCCAACCTCTTCCTCTCTATACCCTACAATCGAAGTCGATGACCTCGTCGAAGATCTCTTCCCGGAAAACACCATTCCTTCAGCTCCTCCAATCGCCGCCGAAGATCTCCTCCAGGAAGACATCAGTCCTTCCGCTCCTCCTATCGCCGCCGAAGATATCCTCATCAAAGTTCCCGGCGCCATTCTCCACCTTATTGATCAACAATACAGCTTCGAGCTCGCGATTGGAGATCTCACCATTATTCGTCTCCGGCAGGGATACAATACTCTTGCTATTTACGCTCGTGTCGCCGACGAGATCCAATGGCCACTTGCCAAGGACGAAGCTGCTGTCAAGGTCGACGACTCGCATTACTTCTTCTGTTTTTGCGTGCCGAAGGAAAAGTGTGATTCCGATTCGAGTGATTCGAGCGACGAAGAAAAGGAAAAGGAAAAGAACCGGCGGAATAAAGGTCGCCGGAAAGGAGATGATGGTTCGGATTTGCTTAGCTATGGATTGACGATTGCGTCGAAAGGACAAGAGGATTTGGTGAAGGAGCTTGATGAGGTTTTGAAGGAATGTAGCAATTTTTCTGTTCAGGAAGTTTCGGAAAAGGCGAAGAAGAAAGGAGAGGCTTTAGATGGTTCTTTGGCGATGGAGATATCGCCAGAGGATTTGAATACGATGAAGGAGAAGAAGGAATTGATGGAGGAAAGGTGTGCTGCTTATTGGACTACATTGGCTCCCAATGTGGAGGATTACAGTGGAACCGCCGCGAAGCTTATTGCGGCCGGTTCTGGACAATTGGTTAAGGGAATTTTGTGGTGTGGTGATGTTACTGTTGATAGGTTGAAATGGGGAAATGAGTTCATTAAGAAGAGGATGGGTCCTCCTTCACAGGCTGAGATTAGTCCCCAAACCTTAAGGCGAATCAAAAGGGCTAAGAAAGTGACTAAAATGACAGAGAGTGTTGCCACTGGGGTCCTCACTGGAGTTGTGAAAGTCTCTGGGTTTTTCACCAGTTCAGTGGCAAATTCCAAAGCAGGAAAGAAATTTTTCAAGCTTCTACCTGGCGAAGTTGTGCTTGCATCATTCGATGGATTCAGCAAGCTGTGTGATGCTGTTGAAGTAGCAGGAAAAAATGTTATGTCAACATCAAATACCGTGACAACCGAGATTGTCCATCACAGATATGGAGAAGAAGCTGCCAAGGCAACTAGTGAAGGACTAGATGCTGCTGGTCATGCAGTGGGGACTGCATGGGCCGCTTTTAAGATTCGACAGGCTTTTAATCCTAAAAGTGTTCTAAAATCTGCCAGCATGGCCAAATTTGCAGCTAAAGCTGCTGCAGATGAATATAAGGCTAAAAAATCCAAGTAA 1455 0.4619 MASQNPNHKNSLYPEVIDSNPEASSPFISNPNPTSSSLYPTIEVDDLVEDLFPENTIPSAPPIAAEDLLQEDISPSAPPIAAEDILIKVPGAILHLIDQQYSFELAIGDLTIIRLRQGYNTLAIYARVADEIQWPLAKDEAAVKVDDSHYFFCFCVPKEKCDSDSSDSSDEEKEKEKNRRNKGRRKGDDGSDLLSYGLTIASKGQEDLVKELDEVLKECSNFSVQEVSEKAKKKGEALDGSLAMEISPEDLNTMKEKKELMEERCAAYWTTLAPNVEDYSGTAAKLIAAGSGQLVKGILWCGDVTVDRLKWGNEFIKKRMGPPSQAEISPQTLRRIKRAKKVTKMTESVATGVLTGVVKVSGFFTSSVANSKAGKKFFKLLPGEVVLASFDGFSKLCDAVEVAGKNVMSTSNTVTTEIVHHRYGEEAAKATSEGLDAAGHAVGTAWAAFKIRQAFNPKSVLKSASMAKFAAKAAADEYKAKKSK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02639 484 PANTHER SPARTIN 7 479 IPR045036 -
Trre15g02639 484 Pfam Senescence domain 286 464 IPR009686 -
Trre15g02639 484 MobiDBLite consensus disorder prediction 1 36 - -
Trre15g02639 484 MobiDBLite consensus disorder prediction 160 190 - -
Trre15g02639 484 Coils Coil 475 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02639 Trre-Chr15 22236927 22241119 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02639 K19366 - gmx:100777392 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02639 15 22236927 22241119 Trre15g02639 15 22236927 22241119 ECH
Trre9g01240 9 10505828 10511593 Trre15g02639 15 22236927 22241119 PCT