Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00983 ATGGATAATTCCTTAAAGGTGATTCAAATCCTTAATTTCTACCTTTCCGAACACCCTTCCATTGTTGGATTCCGATGGAGCGACACACAACGTTGGGGTTCCACATGGTGTTTCCTCTTTACCTCCATAACAATTTACATTATAACCTCTCTTTTTCTCCACCTTTTATTGACTCTTCTTCTTCGCCATACCAAACCTGTTCCTCTCGGTCCTTTACCTGCACTTCATTATCTCACCGTCTCCGTCGTATCCACCATCATATTTTTTGGAATATTACTCTCAACCGTCGTTGAAATCAAAGAAACACGTTGGTTTTGGCGCCGATCAAAAACTCCTCTTCAATGGCTCCTTTGTTTTCCACTTGGTACTCGTCCTTCAGGCCGCGTTTTCTTTTGGTCATATATTTTCTACCTATCTCGTTTCCTCCATATGTTTATAACCTTTTTCGTCATTCTAAGACGTCGTAAACTACTTTTCTTTCAACTCTTTTATCATTGCATTTCCACTTTCATGTCCTTCTTGTGGCTAGAATTCTCCCAATCATTTCAAGTGCTTGCGATTCTTTTCACCACTCTAGCATATTCCGTTATGTATGGTTATAGATTTTGGACCGCGTTTGGGTTGCGCGGCGCATGTTTCTTCCCACTCGTGTTGAACTTTCAAATGGTGTTGTTGGGATGTAACATTGTTTGTCATGTTGGGGTTCTATTGTTGCATTTATATAAAGGTGGGTGTAATGGAATTGGTGCTTGGGTTTTCAATTCTATTTTGAATGGTGCCATTTTGTTGTTATTTGTTAATTTTTATGTGAGGGCTTATCTTGGCAAAAGAAAGAAGATTAACATTGTCAATGATTGCTTTGGTGAACGAAAGGAAGCAGATACCAACAAATTGAAGTTTAATTGA 906 0.3896 MDNSLKVIQILNFYLSEHPSIVGFRWSDTQRWGSTWCFLFTSITIYIITSLFLHLLLTLLLRHTKPVPLGPLPALHYLTVSVVSTIIFFGILLSTVVEIKETRWFWRRSKTPLQWLLCFPLGTRPSGRVFFWSYIFYLSRFLHMFITFFVILRRRKLLFFQLFYHCISTFMSFLWLEFSQSFQVLAILFTTLAYSVMYGYRFWTAFGLRGACFFPLVLNFQMVLLGCNIVCHVGVLLLHLYKGGCNGIGAWVFNSILNGAILLLFVNFYVRAYLGKRKKINIVNDCFGERKEADTNKLKFN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00983 301 Pfam GNS1/SUR4 family 35 279 IPR002076 GO:0009922|GO:0016020
Trre9g00983 301 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 15 276 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00983 Trre-Chr9 7677771 7678676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00983 4 258 Acyl Lipid Metabolism Gene Families AT4G36830 64.202 1.01e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00983 - - gmx:100782066 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00983 9 7677771 7678676 Trre9g00983 9 7677771 7678676 ECH
Trre15g04009 15 50476146 50477069 Trre9g00983 9 7677771 7678676 ECH
Trre9g00983 9 7677771 7678676 Trre15g04009 15 50476146 50477069 PCT