Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04009 ATGTCTAAACCACCGGCAACCGTAATCCCCACAATTTTCTACTACTTGTCAGAACATCCATCAATAATCTCATTCCGTTGGAGTCACACTCACTCATGGGGTTCAACATGGTCATTCCTCTTCACCTCCATAGCCACTTACCTCATCTTCTCTCTCTTCCTCCATCTCTCACTCTCTCTCCTCTTCCCAAACCGCCGTCAAATCCCACTCGGTCCCATCCCCGCCATCCACAGTCTCACCATGTCCTTAATCTCCGTCACAATCTTCACCGGAACACTAATCTCCGCCATCTCCGAAATCCACGACACACGCTGGTTCTGGCGTAACTCCAAAACCCCATTTCAATGGCTTCTCTGTTTCCCCTTAGGAACAAGACCCTCTGGTCGTGTCTTTTTCTGGTCTTACATTTACTATCTCTCACGTTTTATTCATATGTTAAGAACAATCTTAACAATCCTACGACGTCGTAGGTTGTCGTTTTGTCAACTTATGAATCATTCTGTTTCAGCTTTTGTTTCTTTTCTTTGGCTTGAATTTTCACAATCGTTTCAAGTTCTTGCTATTCTTTTTGCAACACTTGTTTATTCTGTTGTTTATGGGTATAGATTTTGGACTGCTATTGGACTTAAATCTGCTTGTTTTCCATTTGTTTTGAATTGTCAGATTTTTTTATTGGGTTGTAATGTTGCTTGTCATGTTGGTGTTTTCTTGGTTCATTTCTTCTTTGAAGGTGGTGGTGGTTGTAATGGAATTGGTGCTTGGGTTTTCAATTCAATTCTCAATACTGCTGTTCTTGTTATTTTTCTTAATTTCTATGTCAAGAAGATGTACTATGTTGTTGGGAGAAGAAAAGTTGAAGAGACTAAATCATCAATGGATTGTTCTACTTCCTCTTGCCCAATGTTAATTGCCGGGTCGCGATAA 924 0.4058 MSKPPATVIPTIFYYLSEHPSIISFRWSHTHSWGSTWSFLFTSIATYLIFSLFLHLSLSLLFPNRRQIPLGPIPAIHSLTMSLISVTIFTGTLISAISEIHDTRWFWRNSKTPFQWLLCFPLGTRPSGRVFFWSYIYYLSRFIHMLRTILTILRRRRLSFCQLMNHSVSAFVSFLWLEFSQSFQVLAILFATLVYSVVYGYRFWTAIGLKSACFPFVLNCQIFLLGCNVACHVGVFLVHFFFEGGGGCNGIGAWVFNSILNTAVLVIFLNFYVKKMYYVVGRRKVEETKSSMDCSTSSCPMLIAGSR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04009 307 Pfam GNS1/SUR4 family 35 275 IPR002076 GO:0009922|GO:0016020
Trre15g04009 307 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 16 276 IPR002076 GO:0009922|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04009 Trre-Chr15 50476146 50477069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04009 7 262 Acyl Lipid Metabolism Gene Families AT4G36830 63.707 7.04e-115 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04009 - - ahf:112788955 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04009 15 50476146 50477069 Trre15g04009 15 50476146 50477069 ECH
Trre15g04009 15 50476146 50477069 Trre9g00983 9 7677771 7678676 ECH
Trre9g00983 9 7677771 7678676 Trre15g04009 15 50476146 50477069 PCT