Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00799 ATGGAGTCAGCACCAGGAGTCAGCGCCACCGCCACCGCCGCCGGCGTCGATGAAGTTTCTCAGGCGGAAACTGCAATATTACGATGGAAATTAGCGGTGTGGCAACAATATCAACGCGTGTTAGACAAAACAACCCCGCACGTGCTATGGCGTTGGATAGGGTTCTCAGTGGTGGCTTTCATCTACGTTCTCCGTGTCTACTTCTTGCAAGGCTTCTACGTCGTTTCATACGCTCTTGGAATTTACATCCTCAATCTTCTCATCGGTTTTCTCTCCCCTCAAGTTGATCCCGCCATCGCCGCCGATGAAGGTCCGACTCTCCCTATCAGAGCTTCCGATGAATTCCGTCCTTTCGTTCGTCGTCTCCCTGAATTCAAATTCTGGTACTCGATCACGCAGGCATTTTGCATTGCTTTTGTGATGACTTTCTTTAGTGCGTTTGATATCCCTGTTTTCTGGCCTATACTCCTCTTCTATTGGGTGGTCCTGTTCTCGCTTACTATGAGGAGACAAATAGCACATATGATCAAATACAGATATGTACCGTTCACATTTGGGAAACAGAACTATCAGGGAAAGAGACCATCAGCGGAAGAAAGCACAAGTCTTCCCGTGGATTGA 621 0.4815 MESAPGVSATATAAGVDEVSQAETAILRWKLAVWQQYQRVLDKTTPHVLWRWIGFSVVAFIYVLRVYFLQGFYVVSYALGIYILNLLIGFLSPQVDPAIAADEGPTLPIRASDEFRPFVRRLPEFKFWYSITQAFCIAFVMTFFSAFDIPVFWPILLFYWVVLFSLTMRRQIAHMIKYRYVPFTFGKQNYQGKRPSAEESTSLPVD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00799 206 PIRSF AtER_Rer1p 13 201 IPR004932 GO:0016020
Trre9g00799 206 PANTHER PROTEIN RER1 16 197 IPR004932 GO:0016020
Trre9g00799 206 Pfam Rer1 family 31 191 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00799 Trre-Chr9 6120061 6122006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00799 14 200 Miscellaneous Gene Families AT4G39220 65.426 9.29e-90 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00799 - - ahf:112799570 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00799 9 6120061 6122006 Trre9g00799 9 6120061 6122006 ECH
Trre9g00799 9 6120061 6122006 Trre15g03799 15 47343767 47345917 PCT