Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00579 ATGACTGCAACCACCCTCATCACTATTAGCCCCGACGAGCTCAGGTTTCATTTTGAGCTGGAAAAGCAAACATTTTGTGATCTTAAAGTCCTCAATAACACACAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCACCTAAGAAGTACTTTGTACGACCAAACACCGGTGTTATTCATCCTTGGGATTCATGTATCATCAGAGTCACACTCCAAGCCCAACGTGAATATCCTCCGGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAGTAGTGGCTCCAAATACTGATGTTGATGATCTTCCGGCAGATACTTTTAATAAGGATAGCGGTAATTTAATAGAGGATTTGAAACTAAGAGTCTCGTATATCACTCCCACCTCACCCGAAGGAAGCTCTGAAGACGATGCAGCGAGGAATTCCGCACAAAAACTTGATTCCTCTTCTAGTCAGGCTGTACAGCTTCTGAAGGAAGAAAGAGATGCCGCTGCCAGACAAACGCGACAGCTTCAACAGGAGCTGGACATGCTGAAAAGGCGAAGAAACCAAAGAGGCGATCCTGGCTTTTCCTTCACCTTCGCCATTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTCTTTTGAAATTTTTATTCTCTTCACCATCTACAGAATAA 663 0.4299 MTATTLITISPDELRFHFELEKQTFCDLKVLNNTQNYVAFKVKTTSPKKYFVRPNTGVIHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTVVAPNTDVDDLPADTFNKDSGNLIEDLKLRVSYITPTSPEGSSEDDAARNSAQKLDSSSSQAVQLLKEERDAAARQTRQLQQELDMLKRRRNQRGDPGFSFTFAIFVGLLGFLLGFLLKFLFSSPSTE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00579 220 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 209 IPR016763 GO:0005789
Trre9g00579 220 SUPERFAMILY PapD-like 4 136 IPR008962 -
Trre9g00579 220 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Trre9g00579 220 Gene3D Immunoglobulins 2 130 IPR013783 -
Trre9g00579 220 PIRSF VAMP_assoc_prot 130 212 IPR016763 GO:0005789
Trre9g00579 220 PIRSF VAMP_assoc_prot 1 157 IPR016763 GO:0005789
Trre9g00579 220 FunFam Vesicle-associated protein 1-1 1 129 - -
Trre9g00579 220 MobiDBLite consensus disorder prediction 127 152 - -
Trre9g00579 220 Coils Coil 155 182 - -
Trre9g00579 220 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00579 Trre-Chr9 4145074 4147780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00579 - - aprc:113869624 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03273 15 31582128 31589124 Trre9g00579 9 4145074 4147780 PCT