Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00572 ATGATGCAATTCAGCACCACCGCACCAGCTCATAATCTTCACAAATTTCAAGCTCTAAGATGTCCCAGTTTCAGATGCCACTCTTCTTCCATCAAACAACAACAACCTATTTCATCTTTTGCTTCTTCTTCTTCTTCTCAAACTCTTAAACCATCTCGTTTACATCTTTCTAACCTTGACAAGTTTCTTGATAGCCAAAAACCATTGGAAACTTCATCAACTACCCACTTTCAACAGCAACAAATACAACAACCGATTCAAAAGAACGACAAAAAAGGTAAAAACTTTCTTGAAGGTCTTAATTTGGCTAAACTATGGCCAGAAATGAAACCAGGAGATGAAATTTCTCCAAGACACCTCAAACGTCTTCAGCGTCTTCTTTCCAAGACGGCGGAGTATTCTCCCAGAAACATCCTCGGCGGTAAGTGGAAGGAATATCACGGCAGCAACGACTGGAAAGGGATGTTAGATCCTCTCGACGATAATCTCCGGCGAGAGGTGGTTCGTTATGGAGACTTAGTCCAAGCAGCTTATCAAGCTTTTCATGCTGATCCAGCCATGTCTTCAACTGAACCACCACAGCACCGCCACGTGTCTTTGCCGGAAAGATCTTACAAAGTTACCAAGAGTTTATACGCCACATCATCCATCGGTTTACCTAAATGGGTCGATGAGGTGGCTCCTGATCTTGGTTGGATGACCCAGCGTTCTAGCTGGGTCGGGTACGTCGCAGTCTGCGACGACAGAAGAGAGATCGCCAGGATGGGACGAAGGGACATCGTGATCTCTCTTCGCGGAACATCCACTTGTCTCGAATGGGCCGAAAACATGAGAGCCCAATTAGTCGACTTATGCGATGACAGCAATAACAGTGAAACCCAAGCCCAGGCCCAAACAAAGCCCAAAGTGGAGTGTGGGTTCATGAGCTTATACAAAACAAAAGGAGCCCATGTACAAAGCCTATCCGAATCCGTTGTAGAAGAAATTAAACGTTTAATTGAACTTTACAAAGGTGAAGAATTAAGCATAACTGTTACAGGACATAGCCTTGGAGCAACACTAGCACTATTGGTGGCTGAAGAAATTAGCACGTGTGGGCCAAACGTGCCACCCGTGGCAGTTTTTTCATTTGGTGGACCTCGTGTAGGTAACAAAGCCTTTGGTGAACATCTTGAAAGGAAGAACGTGAAAGTGCTTAGAGTTGTGAACACACAAGACATGATAACAAGGGTACCAGGAATATTTCTAAGTGAAGAACTTGAAGAAAAATTGAAGAATTCAAAATTGGTTAGTGGTGTTGTTGATATGTTAGAAGAGAACACACCTTTGGGATATTCACATGTTGGAACTGAATTACGTGTTAATACTAAGATGTCACCTTATTTGAAGCCAGATGCTGATATAGCTTGTTGTCATGATTTGGAAGCTTATTTACATTTAGTGGATGGGTATATGGCTTCTAATTGTCCATTTAGAGCTAATGCTAAGAGAAGTTTAGCTAGATTAATGCAAGATCAAAGTGCTAATGTTAAAAAATTGTATACTAGTAAGGCTAAAGGATTGTCTGTTAATCTTAGTAGACAAGGGTCATCACTACAAAATCTTAGTAGACAAGGATCTATGTCTATGTCTACTTGCTTACCTAGTCCATCATCTTCATGA 1662 0.4182 MMQFSTTAPAHNLHKFQALRCPSFRCHSSSIKQQQPISSFASSSSSQTLKPSRLHLSNLDKFLDSQKPLETSSTTHFQQQQIQQPIQKNDKKGKNFLEGLNLAKLWPEMKPGDEISPRHLKRLQRLLSKTAEYSPRNILGGKWKEYHGSNDWKGMLDPLDDNLRREVVRYGDLVQAAYQAFHADPAMSSTEPPQHRHVSLPERSYKVTKSLYATSSIGLPKWVDEVAPDLGWMTQRSSWVGYVAVCDDRREIARMGRRDIVISLRGTSTCLEWAENMRAQLVDLCDDSNNSETQAQAQTKPKVECGFMSLYKTKGAHVQSLSESVVEEIKRLIELYKGEELSITVTGHSLGATLALLVAEEISTCGPNVPPVAVFSFGGPRVGNKAFGEHLERKNVKVLRVVNTQDMITRVPGIFLSEELEEKLKNSKLVSGVVDMLEENTPLGYSHVGTELRVNTKMSPYLKPDADIACCHDLEAYLHLVDGYMASNCPFRANAKRSLARLMQDQSANVKKLYTSKAKGLSVNLSRQGSSLQNLSRQGSMSMSTCLPSPSSS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00572 553 CDD Lipase_3 196 482 - -
Trre9g00572 553 MobiDBLite consensus disorder prediction 532 553 - -
Trre9g00572 553 SUPERFAMILY alpha/beta-Hydrolases 234 484 IPR029058 -
Trre9g00572 553 MobiDBLite consensus disorder prediction 69 88 - -
Trre9g00572 553 Gene3D alpha/beta hydrolase 142 532 IPR029058 -
Trre9g00572 553 Pfam Lipase (class 3) 261 414 IPR002921 GO:0006629
Trre9g00572 553 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 53 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00572 Trre-Chr9 4117854 4119515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00572 24 553 Acyl Lipid Metabolism Gene Families AT4G16820 54.953 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00572 - - tpra:123911420 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00572 9 4117854 4119515 Trre1g05733 1 62307274 62312037 PCT