Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05733 ATGAGACTAAACGGAGAAATCTCAAGCGGAGAAGAAGAAGAAGAAGAAGTAATAATGGAGAAATCTGAGGTGGGTACGACGCCGTTTTTGGGTCAGAAATTGGTTGTTGGTTATGTGTTAACCGCTAAGAAGAAAAAAAGCTTTCTTCAACCAAATTTCATTGCTCTTGCAAGGAGCAAGGGACTATATTTTGTTGCTATTGATGTAAACAAGCCACTGACTGAACACGGTCCATTTGATATTGTCTTGCATAAGTTGTTAGGCGAGGAATGGCGAGATATCATCGAGGATTTCAGGCAAAAACATCCTGAAGTAATCGTCCTTGATCCACCAGATGCAATTCAACATTTACACAACCGCCAATCCATGCTTCAAGATGTGGCGGATCTAAACTTATCTGACTGCAACGGCAAGGTTGGCATCCCACGTCAGCTTGTTATCACAAAAGACAAAAGTCCATCAACCATCCCTTATGAAGTCACTAAAGCTGGATTGAAGTTGCCATTAGTTGCGAAACCGCTAGTAGTGGATGGCAGTGCAAAGTCACATGAACTATTTCTTGCTTATGACGAGTTCTCTCTTTCCGAGCTTGAACCTCCACTGGTTCTGCAAGAGTTTGTCAATCACGGTGGTCTTCTCTTTAAGATTTATATCGTTGGGGAAAGTATAAAGGTTGTGAGGCGTTTCTCTCTTCCTAATATTAGTAAACGGGAGCTATCAAAAGTCTCAGGTGTATACCGTTTTCCAAGAGTTTCGTGTGCAGCAGCTTCTGCAGATGATGCTGATCTAGATCCTAGTATTGCCGAACACCCACCAAGACCTTTGTTGGAAAGGCTTGCAAAGGAGCTTCGCCATAGATTGGGACTTCGCCTGTTCAACGTAGATATGATTCGGGAATATGGGACCAAGGATGTGTTTTATGTCATCGATATCAACTACTTTCCTGGATATGGGAAAATGCCAGACTACGAGCATGTGTTTACAGATTTTCTACTTAACCTAAAGCAGAACAAGTGTAAGAAGAAACTTACCACCTAA 1038 0.421 MRLNGEISSGEEEEEEVIMEKSEVGTTPFLGQKLVVGYVLTAKKKKSFLQPNFIALARSKGLYFVAIDVNKPLTEHGPFDIVLHKLLGEEWRDIIEDFRQKHPEVIVLDPPDAIQHLHNRQSMLQDVADLNLSDCNGKVGIPRQLVITKDKSPSTIPYEVTKAGLKLPLVAKPLVVDGSAKSHELFLAYDEFSLSELEPPLVLQEFVNHGGLLFKIYIVGESIKVVRRFSLPNISKRELSKVSGVYRFPRVSCAAASADDADLDPSIAEHPPRPLLERLAKELRHRLGLRLFNVDMIREYGTKDVFYVIDINYFPGYGKMPDYEHVFTDFLLNLKQNKCKKKLTT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05733 345 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 32 339 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Trre1g05733 345 Gene3D - 110 316 - -
Trre1g05733 345 FunFam Inositol-tetrakisphosphate 1-kinase 25 135 - -
Trre1g05733 345 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 136 332 IPR040464 -
Trre1g05733 345 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 163 322 - -
Trre1g05733 345 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 35 114 IPR041429 -
Trre1g05733 345 PIRSF ITPK 9 345 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05733 Trre-Chr1 62307274 62312037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05733 K00913 - gmx:100127410 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00572 9 4117854 4119515 Trre1g05733 1 62307274 62312037 PCT