Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00392 ATGGCGTTGCAAGGAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAATGTCAATCAACGTTATCGAGCATAGCAGCAAGCAAAGCTGCATCATCTGCTGTGCCAAGTCCTCTTGTTCCTGTCAAATTTTCAAATGATACGGAGAGGCTTCAGCACATTAATAGTATACGGAAAGCTCCTGTTGGAGCTCAGATGAAGCGTGTTATTGATCTTCTTTATGAGACTCGGCAGGCTTTAACATTGGAGCAAATAAATGAAACATGTCATGTGGACATGAAAGCTAACAAAGATGTTTTTGACAATATGAGGAAAAATCCAAAAGTAAGATACGATGGAGAAAGATTCTCTTATAAGTCAAAACATTCCCTTCGGGACAAAAAAGAGCTTCTTTTCCTGATACGCAAATTTCCAGAGGGCATTGCTGTTATCGACTTAAAGGATTCATACCCAACTGTGATGGAGGACTTACAGGCTTTGAAAGGTGGCAGGGAGATTTGGCTGCTGTCCAACTTCGATTCACAGGAAGACATTGCCTACCCTAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGTGGGATTGAATTGCCTCGTGATATGCTTGATATAGAGAGGGATCTCCAGAAAAATGGAATGAAACCTGCTACTAACACTGCAAAGAGGAGAAGTGCAGCACAAATGGAAGGCATTTCATCCAAGCCTAAACCTAAGAAGAAGAAGAATGAAATAACCAAGAGGACCAAGCTGACTAATGCCCATCTTCCGGAGCTTTTTCAGACCTTAAAGAACTCCTGA 813 0.4133 MALQGKLDRFKKQQEKCQSTLSSIAASKAASSAVPSPLVPVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLYETRQALTLEQINETCHVDMKANKDVFDNMRKNPKVRYDGERFSYKSKHSLRDKKELLFLIRKFPEGIAVIDLKDSYPTVMEDLQALKGGREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQTLKNS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00392 270 Pfam TFIIE beta subunit core domain 63 122 IPR003166 GO:0006367
Trre9g00392 270 PIRSF TFIIE-beta 5 269 IPR016656 GO:0005673|GO:0006367
Trre9g00392 270 MobiDBLite consensus disorder prediction 217 270 - -
Trre9g00392 270 Pfam TFA2 Winged helix domain 2 124 181 IPR040501 -
Trre9g00392 270 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 269 IPR016656 GO:0005673|GO:0006367
Trre9g00392 270 MobiDBLite consensus disorder prediction 217 231 - -
Trre9g00392 270 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 49 124 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00392 Trre-Chr9 2846510 2849480 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00392 K03137 - gmx:100788089 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00392 9 2846510 2849480 Trre7g05400 7 60035885 60038509 PCT