Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05400 ATGGCTTTACAACAACAACTAGATAGGTTCAAGAAACAGCAAGAGAAATGTCAATCAACGCTTTCGAGCATTGCAGCAAGTAAGGTTGGTAGCAGAAAACCTAATACTCCGGTGGCTGCAGGATCAACCAATGGAAAAAATGCAACAACTGGTGTCAAATTCTCAAAAGATACTGAAAGGCTTCAGCATATTAACAGCATACGGAAAGCCCCTGTAGGTGCTCAGATGAAGCGTGTTATCGATCTATTGCTTGAGACACGACAAGCATTTACACCAGAGCAAATAAATGAAGCATGCTATGTTGACATGGGGGCTAACAAAGATGTTTTTGACAATCTGAGGAAAAACCCAAAAGTAAACTATGACGGGCAACGGTTCTCTTACAAGGCAAAGTATGGCCTTAAGGACAAAACTGAGCTTCTTCAACTGATACGTAAGTATCCAGAGGGCATTGCTGTTTTCGACCTAAAGGATGCTTACCCCACTGTGGTGGAAGACATGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTCTCCAACTTCGATTCGCAGGACGACATTGCATACCCGAATGACCCTAAAGTGCACATCAAGGTGGACGATGACCTAAAACAGCTATTTCGGAGTATTGAGTTGCCTCGTGATATGATTGATATAGAGAAGGATCTTCAAAAGAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCACAGATTGAAGGAATCTCTTCCAACAAGCCCAAGCCTAAGAAGAAGAAGAGTGAAATTAGCAAGAGAACCAAGCTGACCAATGCCCATCTTCCAGAGCTTTTTCAGAACCTTAAGTAA 843 0.4342 MALQQQLDRFKKQQEKCQSTLSSIAASKVGSRKPNTPVAAGSTNGKNATTGVKFSKDTERLQHINSIRKAPVGAQMKRVIDLLLETRQAFTPEQINEACYVDMGANKDVFDNLRKNPKVNYDGQRFSYKAKYGLKDKTELLQLIRKYPEGIAVFDLKDAYPTVVEDMQALKAAGQIWLLSNFDSQDDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIEGISSNKPKPKKKKSEISKRTKLTNAHLPELFQNLK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05400 280 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 60 135 IPR003166 GO:0006367
Trre7g05400 280 MobiDBLite consensus disorder prediction 226 268 - -
Trre7g05400 280 MobiDBLite consensus disorder prediction 228 247 - -
Trre7g05400 280 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 280 IPR016656 GO:0005673|GO:0006367
Trre7g05400 280 MobiDBLite consensus disorder prediction 25 49 - -
Trre7g05400 280 Pfam TFA2 Winged helix domain 2 135 192 IPR040501 -
Trre7g05400 280 Pfam TFIIE beta subunit core domain 74 132 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05400 Trre-Chr7 60035885 60038509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05400 K03137 - gmx:100802433 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05400 7 60035885 60038509 Trre7g05400 7 60035885 60038509 ECH
Trre9g00392 9 2846510 2849480 Trre7g05400 7 60035885 60038509 PCT