Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00380 ATGTTTCGTTCTGCAAAATGGAAGAGTGAAAAGAACAGAATAAAAGCTGTTTTTAAGCTTCACTTCAATGCCACTCAGGTGTTACAATCTGGGGTGGATGCATTGGTGTTGTCAATAGTTCCTGGTGACATTGGAAGACCAACTAAGAGATTAGAGAAAGCTACGGTTCGAGATGGAAATTGTCGGTGGGAGAATCCGGTATACGAAACAATAAAGTATTTTCAAGATCCCAAGACTGGGAAATTCGGCGACAAAATATATCATTTTTTGCTTTCAACGGGGTTATCGAAAGCTAGCGCCGTCGGGGAGGTTTCTATTAATTTTGCTGACTATGTAGATTCCACAAAGCCGTCTTCTGTCTCTCTTCCCGTCAGAAATTCTCGTTGCGATGCTGTTTTACATGTATCTATCCAAAGGCTGCAAGATAAGGGTGATCAAATTCAAAGAGAGGAAGATGAATGTGAAGATGAAAATCTAAAATTTGATGATAGGAGCTTAAGGAACAAGTTAAGCAATGGCGATAGAGATGAAAACACTAAAAGTTCTTTTTCTGAAGATGTTTCTACCAAAGCAATCATCAATAGGACGTCTAGTGCCAGTGTGTCCGACACTACATTGTCAAGTTCCGATGACAGCTCTGGAGTCGATACTCCCTGCAAAATTGGACTGAGAAAAACAAACATCGGCCACACCACAAACCAAATTGTTCCAGTTATGCACCGTGCTGCAGAACCTCCAAATACTGATGTCAATACCTCAACGCCAATGCATGATTTACATCATAGATCACAATGGGGTTGGTCCTCTAGCTCAGAGCTTGGGCTAAGTACAGGCGACTCGACAAATGGTTATCATAATTCCCTTTCAAAGGAAACGTCACAAGAGGCATCTCATTCGGAAATTGAGAGACTCAAAGCTGAACTTGCTGCTTTGGCGAGGCATGTAGATGTGTCGGACATGGAACTACAGACCCTTAGAAAGCAAATTGTAAAGGAAAGTAAAAGAGGGCAGGATCTCTCGAAGGAAATCATTATCTTGAAAGATGAAAGGGATGCACTAAAGACAGAATGCGATAATATCAGGTCTTTCCATAAACGCATGGACGATGCCAAAGTGAGAAACAGGTCACAGTTGGAAAATGGAGATCATCATGCTTTTGTCGAAGAAATAAGACAAGAATTGAGTTATGAGAAAGACACGAATTCAAATCTCCGATTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTGGTCCTTGCTGTGCAGGACTTGGAAGAAATGTTGGAGCAGAAAAATAGCGATATGTGTAAGTGTAATAATTCCAATAAACACGAACATGATCAAAATTCCCGAGAGTTAGAGATGAAACTCTCAAAAAGTGAAACAGATGATGATGAAGATCAGAAAGCATTGGACGAGCTTGTCAAGGAGAAGAGTGGCGCCAAGGAGACGCACTTGCTCGAGAAAAAAATAATAGACCTCTATGGCGAAATCGAAATGTATAGAAGAGACAAAGAGGAGTTAGAGATGCAGATAGAGCAGATTGCACTAGACTATGAGATATTGAAACAAGAAAACCACAGCATTGCGAATAAGTTAGAGCAAAGCCAATTGCACGAACAGTTAAACATGCAATGTGAATGTTCAAATCCTCCGGCTGCTATGAATGATATGGAAACTCACATTGACAATCTGGAAAATGAACTCAAGGAACAGTCAGAAGATTTCTCGAATTCTCTAGCTACCATTAAGGTACTGGAAACCCATATCAGAAGATTAGAGGAGGAAATGGAGAAACAAGCACAAGGATTTGAAGCTGATATAGAAGCGGTGGCACGTGAAAAAGTTGAGCAAGAGCAAAGAGCTATCCAAGCCGAGGAAACTCTACGAAAGACTAGACAAAAAAATGCTAATACCGCTGAGAGGCTTCAAGAGGAATTCCAAAGACTCTCGATGCAAATGACTTCAACATTTGATGAAAACGAGAAGGCTACCATGAAAGCTTTGACAGAAGCATGTGAACTACGTTCGCAGAAGAATCTACTGGAAGGGATGCTGCATAAAGTCCAAGAAGAGCTTCAGTCAACTAAAGCCGATTATGAGGTAAAACTGAACGAACTTTCCAATCAAATAGATACAATGACGGTTCAGATACAGCAGATGGTGGTGGAAATCGAAGACAAGTCCAAGCAGCTCGAAAATCAGAAGAAGTTTGGAGAACAAGTTAATAATGATTTCTCTGAGGAGATCGAGATAATAAAAGCTGAGAATGAAAAGCTTACGGTGGAGATTTCACGCTTAAATGAACAAGTAGAAGGAAAAGAAAGCTTACAAACTGACTTGGAACTAATGAGAAAATCAATTGAGGAATACGAAACACTGTTACATCAAGGAACTGTGGAAAGAAATGAACTTGCGAGTACAATTGCATCATTGAAGAAGGAAGCGGAGCATACACTTAACGAGCTAAATAAAATGAGAAATCAGAAGGATGAAAAAGAAGCAGAAGCTAGACTCTTGAAGTCCGAGTTGGAAGCTATTAAAGCTCAATGCAGTGATTTGAAACAGTCACTTTTTGAGGATGAGGCTGAGAAAGAAAAACTAAGAAAGCAAATTTCTCAGCTAAAGAGCGAAATAAAGAAGAAGGGCGATGCGTTAACCAGCATTGAGAAGAGGTTCAGGGATAGTCATGGCCGCAACCAACTTTCTGACGGTACTAAAACCAGTCCAATCAACAAAAGAACTGCTTCCAGTCCTCAGAATTCAAAAGAAATGGCAAGTCTGAGAGAGAAAATAAAAATGCTCGAGGGTCTGATAAAGTCAAAGGAAACTGCATTGGAAACTTCTACAACTTCATCTATGAAGAAGGAAAAGGAGCTCCAGAGCCGAATTGTTGAGCTCGAGAACAAAGTAGAGGAAGTCAATCGGAATTTTACTTTACACGAGGATAGAAGTGTAACAGATTCAAACGAGATATCGGAAGAATTAAGGAACAGATTGGAACAAGCTGACAACAATCTTAGTGACGTCTTGGCTGAATTGTCGTCATTGAAAGAAAGAAACAAATCGATGGAAAGCGAACTGAAAGATATGCAAGAGAGATACTCAGAAATGAGTCTAAAATTCGCCGAGGTAGAAGGTGAAAGACAAATACTTGTTATGACTGTAAGAAACCTCAAGAGTTTCCACAAAGGATGA 3201 0.4005 MFRSAKWKSEKNRIKAVFKLHFNATQVLQSGVDALVLSIVPGDIGRPTKRLEKATVRDGNCRWENPVYETIKYFQDPKTGKFGDKIYHFLLSTGLSKASAVGEVSINFADYVDSTKPSSVSLPVRNSRCDAVLHVSIQRLQDKGDQIQREEDECEDENLKFDDRSLRNKLSNGDRDENTKSSFSEDVSTKAIINRTSSASVSDTTLSSSDDSSGVDTPCKIGLRKTNIGHTTNQIVPVMHRAAEPPNTDVNTSTPMHDLHHRSQWGWSSSSELGLSTGDSTNGYHNSLSKETSQEASHSEIERLKAELAALARHVDVSDMELQTLRKQIVKESKRGQDLSKEIIILKDERDALKTECDNIRSFHKRMDDAKVRNRSQLENGDHHAFVEEIRQELSYEKDTNSNLRLQLKKMQESNAELVLAVQDLEEMLEQKNSDMCKCNNSNKHEHDQNSRELEMKLSKSETDDDEDQKALDELVKEKSGAKETHLLEKKIIDLYGEIEMYRRDKEELEMQIEQIALDYEILKQENHSIANKLEQSQLHEQLNMQCECSNPPAAMNDMETHIDNLENELKEQSEDFSNSLATIKVLETHIRRLEEEMEKQAQGFEADIEAVAREKVEQEQRAIQAEETLRKTRQKNANTAERLQEEFQRLSMQMTSTFDENEKATMKALTEACELRSQKNLLEGMLHKVQEELQSTKADYEVKLNELSNQIDTMTVQIQQMVVEIEDKSKQLENQKKFGEQVNNDFSEEIEIIKAENEKLTVEISRLNEQVEGKESLQTDLELMRKSIEEYETLLHQGTVERNELASTIASLKKEAEHTLNELNKMRNQKDEKEAEARLLKSELEAIKAQCSDLKQSLFEDEAEKEKLRKQISQLKSEIKKKGDALTSIEKRFRDSHGRNQLSDGTKTSPINKRTASSPQNSKEMASLREKIKMLEGLIKSKETALETSTTSSMKKEKELQSRIVELENKVEEVNRNFTLHEDRSVTDSNEISEELRNRLEQADNNLSDVLAELSSLKERNKSMESELKDMQERYSEMSLKFAEVEGERQILVMTVRNLKSFHKG 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00380 1066 MobiDBLite consensus disorder prediction 437 469 - -
Trre9g00380 1066 Coils Coil 803 893 - -
Trre9g00380 1066 Coils Coil 926 946 - -
Trre9g00380 1066 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 145 IPR019448 -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 165 183 - -
Trre9g00380 1066 Coils Coil 137 160 - -
Trre9g00380 1066 Coils Coil 958 985 - -
Trre9g00380 1066 Coils Coil 401 435 - -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 165 218 - -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 268 301 - -
Trre9g00380 1066 Coils Coil 987 1049 - -
Trre9g00380 1066 Coils Coil 492 526 - -
Trre9g00380 1066 Coils Coil 556 661 - -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 268 294 - -
Trre9g00380 1066 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 978 - -
Trre9g00380 1066 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 903 926 - -
Trre9g00380 1066 Coils Coil 680 795 - -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 184 215 - -
Trre9g00380 1066 MobiDBLite consensus disorder prediction 892 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00380 Trre-Chr9 2752700 2757419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00380 - - cam:101499947 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00380 9 2752700 2757419 Trre7g05410 7 60119470 60124017 PCT