Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05410 ATGTTCAGATGGAGGAGTGAGAAAAATAAAGTCAAAGCTGTTTTCAAACTCCACTTTCATCTCACTCAGGTGGTGCAATCTGGTGTGGATTCTTTGGTGTTGTCTATAATTCCTGGAGATAATGGAAAACCAACTACAAGATTAGAGAAAGCTATAGTAACTGATGGAATTTGTAAATGGGAGAATCCTGTTTATGAAAATGTTAAATTTGTTTATGACACTAAGAATGGAAAATTCACTGAAAAAATTTATTATTTTGTTGTTTCAACGGGGTTATCAAAAGCAAGTATTTTTGGGGAAGTTTCTATAGATTTTGCTGATTATGCAGAAGCTACAAAGATTTCTTCTGTTTCTCTTCCCATCAAGAACTCACATTCTGATGCTGTCTTGCATGTATCAATTCAGAGATTACAAGAAAATAATGATAAAAGAGAGGAAGAGGAATGTGAAGATACCAAACTAAAACCCAATGATAGGAGCTTAAGGACCTATTTAAGCAATGGAGATCTTAATGGATGCACTAAAAGTGATTCTTCTGAAGATGTGTCTGCCAATGCAAACACAGATAGATCTGGATTGAGTGTTGATTGTAGGACATCTAGTGGATCTGACATTACATTGTCAAGTTCCGATGGAAGCTCTGGACTTGATACTCCCCGAGAACTTGCACTAAGAAATACTATCATCCAGGCAACCACAAATGGTGTCCCTTCGGAGCCTCAAAAACCTGCTGTGAATGCCTTACCATCAATGTATGATGTACATCAGAGATCATCACATTTCCGGGACCGTTCAGCTAGTTCAGAACATGGTCTGAGTACAGACGATTCATCACATGGCTCTCATGATGCCCTTCCGAGGGAAAAATCCCATCAGGCATCGGATTTAGAGAATGAGAAGTTGAAGGCTGAAGTTGCTGCTTTGGCTAGGCAGGTAGATGTTTCAGACATGGAACTTCAGACTCTTCGGAAGCAAATCGTAAAGGAAAGCAAAAGTAGGCAGGAGCTCGCGAAGGAAGTTATCAGCTTGAAAGAGGAAAGAGATACACTCAAGATAGAATGCGAAAATCTAAAGTCTTTACGCAAACGAGTGGATGAAGCCAAAGTGAGTAGCAGGTCACAATTAGGAAGCGGAGATCTTCATACTCTTGTTGAAGAAATCAGACAAGAATTGAATTATGAGAAGGACCTGAATGCAAATCTCAGACTGCAGTTAAAGAAGACGCAAGAATCAAATGCTGAACTGGTTCTCGCTGTTCAGGACCTCGATGCAATGTTGGAGCAGAAAAATAGGGAAATACACAGCCGTTCCAATAATTACGAACATACTAAAAACTCCCGTGATTTAGGGAGAGACCCCTCTAATTGTGAAACAGATGATGATGAACAAAAAGAATTGGATGAGCTTGTTAAGGATCAAAGCAGTGCCAAGGAGACACACTTACTTGAGCAAAAAATCATGGATCTCCATAGTGAAATAGAGATGTATAGAAGAGACAAAGACGAGTTAGAGATGCAGATGGAGCAGCTTGCACTGGACTATGAAATTTTGAAACAGGAAAACCATGACTTTGCATATAAGCTGGAACAGAGCGAACTGCAAGAACAGTTAAAAATTCAGTATGAATGCTCTCCTCCTCCTGGCATAGAAGACTTTGAAGCGCATATCCAGAATCTGGAAAGTCGACTCAAGAAACAGTCAGAAGAATTCTCAGATTCTCTGGAAACCATCAAGTCTCTTGAGAACCAAATCAGCAAATTAGAGGAGGAACTGGAAAAACAATCCCAAGGATTTGAAGCTGACTTAGATGCAGTGACACATGACAAAGTTGAGCAAGAGCAAAGAGCCATTCGAGCCGAGGAAGCTTTGAGAAACACCAGACTTAAAAATGCTAATACTGCTGAGAGGCTTCAAGAAGAATTTAGAAGGCTTTCAATGCAAATGGCCATGACATTTGAGGCAAACGAGACGGCTACCATGAGAGCGCTGACAGAAGCAAATGAACTTCGTGTTCATAAAAGACTACTGGAGGAAATGCTGTGTAAAGTCAAAGAAGAGCTTCAGTCAGTCAAAGCTGATTATGAGGTAAAACTGAATGAACTTTCCAACAAAATAGATACCATGACAGTTCAGATGCAACAGATGTTGTTGGAAATTGACGAAAAATCGGTGCAACTTGAAAACAAGAAAAAGCACGGGGAACAAGCTGGTAAAGATTTCTCCGAAGAGATCCAGTGTCTAAAATCCGAGAATGAAAAGCTTACAGTGGAGATCTCAAGCTTATCTGAGCTAGTAAAACAAAAAGAAATCTTAAGTTCTGACTTGGAACTTATGAAGAAATCAGTTGAGGAATATGAGATCCTGTTAAATACTCGAAAGGAAGAAAGAAACGAGCTTGTGAGTACAATTGCTTTGTTGAAGAAGGAAGCAGAACGATCACTTGGTGAGCTAAATAGGATGATGCATCTCAAGGATGAAGAAGAGAAAGTCAGTAGACTCTTGCATTCAGACTTAGAAGTACTTAAAGTTCAATATAGTGAACTGAAACGTTCTCTTACTGATGACGAGACTGAGAAAGAAAACCTAAGACAACAAATTTTCCATCTTAGAAGTGAACTGAAGAAGAAGGACGATGCATTAACCACAATTGCTTCAATTCCTCAGAATTCCAAAGAAATGACAAATCTAAGTGAGAAAATAAAAATGCTCGAGGACCTGGTAAAGTCAAAGGAGATGTCCTTGGAAACATCAGCTTCTTCACTTTTGGAGAAGGAAAGCGAACTTCAATCCAAAGTTGATGAACTGGAGGACAAAATGGAGGAACTCAATCAAAGAATCAAGGTTGTTGCGGATACAAGTCTTGCTTCTACAAATGACAGATCTGAAGAAGTAAGAAGTACAATTGAGCATCTCATTGATACTTCGTGTATCTCTGAAGAAAACGGGGCTGTAGTGTCATCATCCAAGAGTCATGCAGCACATTTGTCTGAGAAAGAAGAAGAAATACACACAATGGATACTAATGGCGATGGCAGCATCAGTGACGTATTAACTGAACTATCATCATTGAAAGAAAGAGACAAATCAATGGAAACCGAATTGAAAGAATTGCAAGAAAGATACTCAGAAATGAGTCTCAAATTTGCAGAAGTAGAAGGTGAAAGACAAAAGCTTGTCATGACAGTAAGAAGCCTCAAGAATTCTAGGAAGGGTTAA 3216 0.3921 MFRWRSEKNKVKAVFKLHFHLTQVVQSGVDSLVLSIIPGDNGKPTTRLEKAIVTDGICKWENPVYENVKFVYDTKNGKFTEKIYYFVVSTGLSKASIFGEVSIDFADYAEATKISSVSLPIKNSHSDAVLHVSIQRLQENNDKREEEECEDTKLKPNDRSLRTYLSNGDLNGCTKSDSSEDVSANANTDRSGLSVDCRTSSGSDITLSSSDGSSGLDTPRELALRNTIIQATTNGVPSEPQKPAVNALPSMYDVHQRSSHFRDRSASSEHGLSTDDSSHGSHDALPREKSHQASDLENEKLKAEVAALARQVDVSDMELQTLRKQIVKESKSRQELAKEVISLKEERDTLKIECENLKSLRKRVDEAKVSSRSQLGSGDLHTLVEEIRQELNYEKDLNANLRLQLKKTQESNAELVLAVQDLDAMLEQKNREIHSRSNNYEHTKNSRDLGRDPSNCETDDDEQKELDELVKDQSSAKETHLLEQKIMDLHSEIEMYRRDKDELEMQMEQLALDYEILKQENHDFAYKLEQSELQEQLKIQYECSPPPGIEDFEAHIQNLESRLKKQSEEFSDSLETIKSLENQISKLEEELEKQSQGFEADLDAVTHDKVEQEQRAIRAEEALRNTRLKNANTAERLQEEFRRLSMQMAMTFEANETATMRALTEANELRVHKRLLEEMLCKVKEELQSVKADYEVKLNELSNKIDTMTVQMQQMLLEIDEKSVQLENKKKHGEQAGKDFSEEIQCLKSENEKLTVEISSLSELVKQKEILSSDLELMKKSVEEYEILLNTRKEERNELVSTIALLKKEAERSLGELNRMMHLKDEEEKVSRLLHSDLEVLKVQYSELKRSLTDDETEKENLRQQIFHLRSELKKKDDALTTIASIPQNSKEMTNLSEKIKMLEDLVKSKEMSLETSASSLLEKESELQSKVDELEDKMEELNQRIKVVADTSLASTNDRSEEVRSTIEHLIDTSCISEENGAVVSSSKSHAAHLSEKEEEIHTMDTNGDGSISDVLTELSSLKERDKSMETELKELQERYSEMSLKFAEVEGERQKLVMTVRSLKNSRKG 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05410 1071 Coils Coil 486 520 - -
Trre7g05410 1071 Coils Coil 549 597 - -
Trre7g05410 1071 MobiDBLite consensus disorder prediction 256 298 - -
Trre7g05410 1071 MobiDBLite consensus disorder prediction 433 463 - -
Trre7g05410 1071 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1070 - -
Trre7g05410 1071 MobiDBLite consensus disorder prediction 433 458 - -
Trre7g05410 1071 Coils Coil 684 718 - -
Trre7g05410 1071 Coils Coil 291 363 - -
Trre7g05410 1071 Coils Coil 744 764 - -
Trre7g05410 1071 Coils Coil 838 879 - -
Trre7g05410 1071 Coils Coil 609 629 - -
Trre7g05410 1071 Coils Coil 918 952 - -
Trre7g05410 1071 Coils Coil 807 827 - -
Trre7g05410 1071 MobiDBLite consensus disorder prediction 160 218 - -
Trre7g05410 1071 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 8 143 IPR019448 -
Trre7g05410 1071 Coils Coil 1020 1054 - -
Trre7g05410 1071 Coils Coil 893 913 - -
Trre7g05410 1071 Coils Coil 384 404 - -
Trre7g05410 1071 MobiDBLite consensus disorder prediction 160 216 - -
Trre7g05410 1071 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Trre7g05410 1071 Coils Coil 412 432 - -
Trre7g05410 1071 Coils Coil 778 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05410 Trre-Chr7 60119470 60124017 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05410 - - gmx:100819574 1421.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05410 7 60119470 60124017 Trre7g05410 7 60119470 60124017 ECH
Trre9g00380 9 2752700 2757419 Trre7g05410 7 60119470 60124017 PCT