Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00361 ATGGAACTAATTTACAAGAAAGGGACTTTATCATCCATGGATTTAGGGAAGGTAGAGTCAAACAAAAGGGAAGGTGCATGTTTTAAATTGTCTTCCCTCCATTACCAATTTTTGCACAAAGACAAAGAAAGAGTAAGACATAGACGAGGTAGAAGAGTTATTGTTGCCACTGGACCTGCCATAGAGGCTCCTGTTATTGCCACTGAACCATTAACAAAAGATGATCTTATTCACTACATGGTATCTGGTTGCAAGCCTAAGGAAAAGTGGAGAATAGGAACAGAACATGAGAAGTTTGGTTTTGAATTTGATACTTTGCGTCCAATCAACTACAAACAAATATCAGCTCTACTTAATGGTATTGCTTTGAGGTTTGATTGGGACAAAATTATGGAAGGTGACAACATCATAGGACTCAAAACTGGGGAACAAAGCATATCATTGGAGCCTGGTGGTCAAATTGAGCTTAGTGGTGCACCTTTCAAAACATTGCATCAAACTTATGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTTGCAGAGGAAATGGGAATTGGATTTTTGGGATTAGGTTTTCAGCCTAAATGGAAACTACAAGACATACCACAAGTGCCCAAGGTACGTTATGACATTTTGAAAAATTACTTCAGTAAATTTGGGTCACTTGGTGTTCACTCATTGTTAATGACATGTTCTATTCAGGTGAATTTGGACTTCAGTTCTGAAGCCGACATGATCAAGAAAATGCGTGCAAGTCTCGCGTTGCAGCCTTTAGCAACAGCCTTATTTGCAAATTCACCTTTCAAGCAAGGACTTCCAAATGGTTATGTCACCTTTAGAAGTTATGTGTCCAGTCACATTGATAAACGTCGTACTGGAATGCTCCCGTTTGTTTTCAATGATACTTTTGGGTTTGAGCAGTTTGTTGATTATGCTCTTGATGTACCGATGATATTTGTTTATCGAAAAAATAAATATATTGCTTGTGGTGGCATGTCATTCCGGGACTTTATGGCTGGTAAACTTCCTGCCATTCGAGGTCAAGTGCCAACAATCAGTGACTGGGAAAATCACCTAACAACTATATTTCCTGAGGTGAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATGGGGGGCCTTTGAGTATGCTATGTGCTTTGCCTGCTTTTTGGGTAGGTCTACTATATGATGAGGTCTCACTGCATAATGTTCTAGACATGATTGCTGATTGGACCACTGAAGACAGACAATATTTAAGAAATCAGGTTCCTTTTACTGGTTTGAAGACTCCATTTCATGGTAGATTGTTGCAACATGTTGCTGAAGATGTGTTGAAGTGGGCAAAGGATGGCTTGGAAAGAAGATGCTTAAATGAATCCATATTTTTGGATCCATTGATTGAAGTGGTTGAAACAGGTGTAACACCAGCTGAGAAGCTTTTGGATGTGTACAATAACAAGTGGGGAAATAACATAGATCATGTGTTCAGAGAGTGTTGTTACTGA 1515 0.3914 MELIYKKGTLSSMDLGKVESNKREGACFKLSSLHYQFLHKDKERVRHRRGRRVIVATGPAIEAPVIATEPLTKDDLIHYMVSGCKPKEKWRIGTEHEKFGFEFDTLRPINYKQISALLNGIALRFDWDKIMEGDNIIGLKTGEQSISLEPGGQIELSGAPFKTLHQTYDEINSHLYQAKTVAEEMGIGFLGLGFQPKWKLQDIPQVPKVRYDILKNYFSKFGSLGVHSLLMTCSIQVNLDFSSEADMIKKMRASLALQPLATALFANSPFKQGLPNGYVTFRSYVSSHIDKRRTGMLPFVFNDTFGFEQFVDYALDVPMIFVYRKNKYIACGGMSFRDFMAGKLPAIRGQVPTISDWENHLTTIFPEVRLKRYMEMRGADGGPLSMLCALPAFWVGLLYDEVSLHNVLDMIADWTTEDRQYLRNQVPFTGLKTPFHGRLLQHVAEDVLKWAKDGLERRCLNESIFLDPLIEVVETGVTPAEKLLDVYNNKWGNNIDHVFRECCY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00361 504 NCBIfam glutamate--cysteine ligase 70 504 IPR011556 GO:0004357|GO:0006750
Trre9g00361 504 PIRSF GCL 56 504 IPR035434 GO:0004357|GO:0006750
Trre9g00361 504 SUPERFAMILY Glutamine synthetase/guanido kinase 82 496 IPR014746 GO:0003824
Trre9g00361 504 Gene3D - 56 504 - -
Trre9g00361 504 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 42 504 IPR035434 GO:0004357|GO:0006750
Trre9g00361 504 Pfam Glutamate-cysteine ligase family 2(GCS2) 123 414 IPR006336 GO:0004357|GO:0042398
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00361 Trre-Chr9 2577958 2581659 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00361 K01919 - gmx:100775188 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00361 9 2577958 2581659 Trre7g05433 7 60269253 60275647 PCT