Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00300 ATGTTGAAATTGTTTGCACTCCGGGGGCTGCCATGGAGCCCCAGTAATGGTAGTCGTGAAAAGGTTGAATTAACAGCCGCAGAATTAGAGGCTCTTCGATCAGAACTTGCTGATTTAGAAGAGAAGGAAGCTCAATTAAAAGCTCAGTTGGAAAATATTGATGAAATTTTACGATCAGCTCGTCTATCTGGATATTTATACATCCGAACTAGATGGGCGGCACTTCCGGGAGAACCTCTACCTATTGATGATACCGATGTAGATGATTGGCTTCCTCGGTTTGTTGTTCTTCAGGGTGAATGTCTATTCTTATATTTGTTGTGTACAGACTTAAGTCCTCAAGACTCAACGCTTCTATCCGACATTGTTGAAGTAAACCACTTACCAAGTTTTAAGCGTGAAGATAGTGACATGAGATACGCCTTTTGTATTTTAACTCGACATGGATTACGATATGAATGCTCCAGCAGTTCTAAAATACAGGTGGACTCGTGGTTATCGGCTCTACAATCTGGCTGCAAACTGGAATCTGATATATCAATTCCCAATGGTTCAATCTAG 561 0.4118 MLKLFALRGLPWSPSNGSREKVELTAAELEALRSELADLEEKEAQLKAQLENIDEILRSARLSGYLYIRTRWAALPGEPLPIDDTDVDDWLPRFVVLQGECLFLYLLCTDLSPQDSTLLSDIVEVNHLPSFKREDSDMRYAFCILTRHGLRYECSSSSKIQVDSWLSALQSGCKLESDISIPNGSI 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00300 186 PANTHER OS05G0595500 PROTEIN 1 178 - -
Trre9g00300 186 Coils Coil 19 59 - -
Trre9g00300 186 ProSiteProfiles PH domain profile. 59 174 IPR001849 -
Trre9g00300 186 SUPERFAMILY PH domain-like 53 173 - -
Trre9g00300 186 Gene3D - 55 179 IPR011993 -
Trre9g00300 186 SMART PH_update 60 176 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00300 Trre-Chr9 2145488 2146825 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00300 - - ccaj:109810881 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00300 9 2145488 2146825 Trre7g05555 7 61203925 61206324 PCT