Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05555 ATGGATGATAGACCTGAAAGATTAAAAATAATCCCTGATCACTTTCAAATTCCAACATCAAGTGTAGAATCTACTGGGAGCAGAAAATCATCTACTACTGAAGAACCTAGAATTGATCAATCTTTAAGGCCCTCGCTCCAGCTGTGGACTCGAAGAAAATTTAGGACAACTTTCATGTTGAACTTGTTTACTCTGCGAAGACTTTCATGGGGGTCTGACACTGGAGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAATTAGAGTCACTTCGATCAGAGCTTGCTGATTTAGAGGAGAAGGAAGCTCACTTAAAAGCTCAGTTGCAACATATTGATGAAGTTCTGCGATCAGCTCGTCTCTCTGGCTATTTACAAATTAGAACTAGATGGGCAGCACTTCCGGGAGAACCCCCACCTTTAGATGATACTGAAGTAGATGATTGGCTTCCTCGCTTTGTCGTTCTCCATGGAGCATGTATATTCTTATATTTCTTATCTACAGATATAAGTCCTCAGGACTCAACACTTTTATCTGATATTCTCGAAGTGGGGAGATTGCCATGTTTTAAACGTGAAAACGATGATATCCAGCATGCCTTTTATATTTTAACTCGTCATGGGTATCGATATGAGTGCTCAAGCAATTCTATGATACAGGTGGACTCTTGGTTAACAGCTTTACAAAGTTACAGCAAATTAGAATCCGATAAATCAGTTCCTAATGGTTCGATTGAGATGTAA 741 0.3995 MDDRPERLKIIPDHFQIPTSSVESTGSRKSSTTEEPRIDQSLRPSLQLWTRRKFRTTFMLNLFTLRRLSWGSDTGGQEKVELTAAELESLRSELADLEEKEAHLKAQLQHIDEVLRSARLSGYLQIRTRWAALPGEPPPLDDTEVDDWLPRFVVLHGACIFLYFLSTDISPQDSTLLSDILEVGRLPCFKRENDDIQHAFYILTRHGYRYECSSNSMIQVDSWLTALQSYSKLESDKSVPNGSIEM 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05555 246 Gene3D - 115 241 IPR011993 -
Trre7g05555 246 Coils Coil 80 114 - -
Trre7g05555 246 SUPERFAMILY PH domain-like 112 231 - -
Trre7g05555 246 PANTHER OS05G0595500 PROTEIN 1 235 - -
Trre7g05555 246 ProSiteProfiles PH domain profile. 117 232 IPR001849 -
Trre7g05555 246 MobiDBLite consensus disorder prediction 1 39 - -
Trre7g05555 246 SMART PH_update 118 234 IPR001849 -
Trre7g05555 246 CDD PH 148 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05555 Trre-Chr7 61203925 61206324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05555 - K00940 mtr:25502183 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05555 7 61203925 61206324 Trre7g05555 7 61203925 61206324 ECH
Trre9g00300 9 2145488 2146825 Trre7g05555 7 61203925 61206324 PCT