Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00285 ATGGCCTCTGAGAATGACTATTTTCACCTCTCTGGACCCTTACATCTAACTTATTATGTTAATTGGATGGATGCATATTATCGAAAGTCAATAGCTGCTAGTTTGGTCCAAGGTGTTTATGTTCTAGAAAAAGACCGCCAAGAACAACGAACAGGTCCCAAGTCTCTAGCATTTCCTTGGTGGACATCCTTCCATTTTCAGATGATTGAACAACTATTTGATGGTACTTCCATATTTGGTGCTGTTTTTGAGTACAATCCTCCACCATCAATAGGCCACAACCCCTATCATAGAAGTCCACGTTATGTAATTGCCTTTCGAGGGACTATAAAAAAACCAGGCTCTGTTTTTCGCGATATGAAATTGAATCTACAAACTGCCATACATGGACTTCATCGAACTTCACGCTCGAAGATAGCTACCGAAACTGTAAAAAATGTGGTGGCTAGTGTTGGTGGTAATGGTTCCAACATATGGTTGGCTGGTCATTCTCTAGGATCTTGCATCGCTTTACATGCCGGCAAAACAATGGCTAAAAGTGGCACATTTATTGAGTCCTTTCTTTTCAACCCTCCATTTCTATCTCCTCCAATTAATCAGATTATTAACTGTGAGGGAATGAAACATGGGATTCGAACTATCGGCAGCATTCTAACATCCGCCACAGTTGCCATTGCTGCGAATTTGGATATGCAAAGTTCGTACTTAACTTCATTTGCTACTATGTCTGATTGGATTCCATGCTTATTTGTGAATCCATGTGACTATATATGTTCGGAGTATGTCGAATACTTTGAACATCGAAGAAAAATGGAAGAGATTGGTGCTGGTAGCATCGGAAAGATAGCAACACAAAACTCAATTGTTTCTCTAATGATGAGTGCTTTTGGAAAGGAATCTGAACCTTTGCATCTCATTCCTTCAGCTTATTTGATAAAGAATTTGACCCCTCAACAAAGTTTCAAAGAAGATCATGGGATTCAGCAGTGGTGGAAACCAGACTCATACCTGGAATCCAAGCTTTACAAATACTAG 1035 0.3981 MASENDYFHLSGPLHLTYYVNWMDAYYRKSIAASLVQGVYVLEKDRQEQRTGPKSLAFPWWTSFHFQMIEQLFDGTSIFGAVFEYNPPPSIGHNPYHRSPRYVIAFRGTIKKPGSVFRDMKLNLQTAIHGLHRTSRSKIATETVKNVVASVGGNGSNIWLAGHSLGSCIALHAGKTMAKSGTFIESFLFNPPFLSPPINQIINCEGMKHGIRTIGSILTSATVAIAANLDMQSSYLTSFATMSDWIPCLFVNPCDYICSEYVEYFEHRRKMEEIGAGSIGKIATQNSIVSLMMSAFGKESEPLHLIPSAYLIKNLTPQQSFKEDHGIQQWWKPDSYLESKLYKY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00285 344 SUPERFAMILY alpha/beta-Hydrolases 77 261 IPR029058 -
Trre9g00285 344 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 339 - -
Trre9g00285 344 Gene3D alpha/beta hydrolase 62 276 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00285 Trre-Chr9 2014376 2016365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00285 2 338 Acyl Lipid Metabolism Gene Families AT5G24180 42.733 9.86e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00285 - - gmx:100786952 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00285 9 2014376 2016365 Trre9g00285 9 2014376 2016365 ECH
Trre9g00285 9 2014376 2016365 Trre7g05568 7 61277388 61279014 PCT