Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05568 ATGGCTTCTGAGAGGGAAAGTTTTGACCTCTCAGGACCTTTGCATTTGACTTATGTTTTATGGGACAATCCATATCATCGAATGTCAGTTGCTGCTTGTTTAGTCCAAGGTGTTTATATTCTAGAAAGGGACCGGCAGGAAAAACGTGAAGGTTCGGATGCTCTTGCGCCGCCTTGGTGGACATTTTTCCATTTTGAGCTGCTTCGACCACTTGTAGATGATGTTGATGATTCCATCTTTGGTGCAATCTATGAGTTCAAGCCTCCATCTTCACAAAGTAACGACACTTTATATCGAAGTCCACGTTATGTGATTGCCTTTCGAGGAACTCTAACGAAAGCACACTCGGTTTCACGTGATGTTGAGTTAGATATCCACTTCATCCGACAAGGTCTTCATAAAACTTCGCGCTCTAACATAGCTATCCAAGCGGTTCGAAACACGGTAGCAACCGTAGGTGATTCAAATGTTTGGTTGGCTGGACACTCCCTAGGATCAGCGATGGCGTTGCTTACCGGGAAAACCATGGCAAAGGATGGCAATTTTATCGAATCCTTTCTTTTCAACCCTCCCTTCACATCTGCTCCACTTGAGAAGATTAAGGATGAGAGAGTAAAACATGGCATTCGATTCGCCGGCAGCGTGATAACAGCTGGACTCAGCCTAGCTATGAAAGCAAAGCAGCAGTCGAAGGATTTAATTATCGACCCATTTGCTGCTTTGTCTGCGTGGGTCCCATGTTTGTTTGTGAATCCATCTGATTATATATGTTCAGAGTATATTGGATACTTCGAACATAGGAGAAATATGGAGGATATTGGCGCAGGAGTGATTGAAAGGTTAGCAACTCAAAACTCACTCGGTGGCTTACTGATGGGTGCATTCGGTGGGAACGGATCTGAACCATCTGAACCACTGCACCTCATTCCTTCAGCTTCTCTGACGATTAATGTTGCTCCTTCCGATTTCAAAGAAGCTCATGGGATTCATCAGTGGTGGCAACCTGACTTGAGACTTGAATACAAGCTCTACAATTACAAATAG 1044 0.4425 MASERESFDLSGPLHLTYVLWDNPYHRMSVAACLVQGVYILERDRQEKREGSDALAPPWWTFFHFELLRPLVDDVDDSIFGAIYEFKPPSSQSNDTLYRSPRYVIAFRGTLTKAHSVSRDVELDIHFIRQGLHKTSRSNIAIQAVRNTVATVGDSNVWLAGHSLGSAMALLTGKTMAKDGNFIESFLFNPPFTSAPLEKIKDERVKHGIRFAGSVITAGLSLAMKAKQQSKDLIIDPFAALSAWVPCLFVNPSDYICSEYIGYFEHRRNMEDIGAGVIERLATQNSLGGLLMGAFGGNGSEPSEPLHLIPSASLTINVAPSDFKEAHGIHQWWQPDLRLEYKLYNYK 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05568 347 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 345 - -
Trre7g05568 347 Gene3D alpha/beta hydrolase 80 210 IPR029058 -
Trre7g05568 347 Pfam Lipase (class 3) 122 181 IPR002921 GO:0006629
Trre7g05568 347 SUPERFAMILY alpha/beta-Hydrolases 18 207 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05568 Trre-Chr7 61277388 61279014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05568 1 276 Acyl Lipid Metabolism Gene Families AT2G05260 60.000 2.13e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05568 - - tpra:123915632 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00285 9 2014376 2016365 Trre7g05568 7 61277388 61279014 PCT