Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00283 ATGGCCAAACATGAAACACAACCACCACCACCGTCAAACAGCACCAACCTCGCTTCATGTCTTGTCGCAACCATATTCTTAATCTTCATCTTCATAACAATCTTCACACTTTACTTTACACTTTTCAAACCACAAGATCCAAAAATCTCCGTTAGCGCCGTTCAACTTCCATCTTTTAACGTTACAAATAACGGCACAACAATCAATTTCACTTTCTCACAATACTCTTCTGTTAAAAACCCTAACAGAGGAACTTTCTCACACTATGATAGTTCTTTTCAGCTTCTTTACTATGGAAAACAAATCGGTTTCATGTTTGTTCCTGCCGGGAAGATTAGTTCCCGGAGAACTCAATATATGGCTGCTACTTTCACTGTTCAGTCTCTTCCGTTGGGCTTGGAGCCCAATGGGCCTGATGGGCTTAAAATGGGGCCCACTGTGGAGATTGAATCTACAATGGAAATGGTTGGGAGAGTGAGAGTTTTGCATCTGTTCAGTCATCATGTGGAAGCTAAAGCTGAATGCAGAGTTGCCATTGCTGTATCTAATGGAGCTGTTTTAGGTTTTCATTGTTAA 576 0.4115 MAKHETQPPPPSNSTNLASCLVATIFLIFIFITIFTLYFTLFKPQDPKISVSAVQLPSFNVTNNGTTINFTFSQYSSVKNPNRGTFSHYDSSFQLLYYGKQIGFMFVPAGKISSRRTQYMAATFTVQSLPLGLEPNGPDGLKMGPTVEIESTMEMVGRVRVLHLFSHHVEAKAECRVAIAVSNGAVLGFHC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00283 191 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 12 191 - -
Trre9g00283 191 Pfam Late embryogenesis abundant protein 77 175 IPR004864 -
Trre9g00283 191 SUPERFAMILY LEA14-like 27 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00283 Trre-Chr9 2009124 2009699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00283 - - psat:127120822 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00283 9 2009124 2009699 Trre9g00283 9 2009124 2009699 ECH
Trre9g00283 9 2009124 2009699 Trre7g05569 7 61280604 61281254 PCT