Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05569 ATGTCGGATAGACCCATCATCCCCACCACCACCACCACCACCGCCTCAACCACCAGGCCAAAGAGACCACGACCACCGTCAGGACGCACCAACCTAGCGTCATGTGTAGTTGCTACAATCTTCCTGATTTTCATCATCATCGTCATCCTCATAGTATACTACACTGTTTTCAAACCACAAGATCCAAAAATCGCCGTCAACGCCGTTCAACTTCCATCCTTCTCCGTTACTAACGGCACCGTTAATTTCACTTTTTCCCAATACGCTTCCGTTAGAAACCCTAACCGAGCTGCTTTCTCTCACTACGACAGCTCACTTCAAATCCTCTATTCCGGCAGTCAAGTCGGTTTCATGTTCATTCCCGCCGGCGAGATCGACGCCGGAAGAACACAATACATGGCAGCTACTTTCTCTGTTCAGTCTTTTCCGTTATCAGCGCCACAAAATATGGGTCCCACACTGGCGAATGGCGATGGTGTTGGATTTAACTTTGGGTTGAGAGTTCAACCGACGATGGAGATTGAGACGAAACTGGAAATGGTAGGACGTGTTAGGGTTTTGCATTTCTTCAGTCACCGTGTTATGGTCAGAACTGGTTGCAGAGTTGCCATTGCCGTCAATAATGGTGCTGTGTTAGGTTTTCACTGCTAA 651 0.4808 MSDRPIIPTTTTTTASTTRPKRPRPPSGRTNLASCVVATIFLIFIIIVILIVYYTVFKPQDPKIAVNAVQLPSFSVTNGTVNFTFSQYASVRNPNRAAFSHYDSSLQILYSGSQVGFMFIPAGEIDAGRTQYMAATFSVQSFPLSAPQNMGPTLANGDGVGFNFGLRVQPTMEIETKLEMVGRVRVLHFFSHRVMVRTGCRVAIAVNNGAVLGFHC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05569 216 MobiDBLite consensus disorder prediction 1 28 - -
Trre7g05569 216 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 216 - -
Trre7g05569 216 SUPERFAMILY LEA14-like 42 142 - -
Trre7g05569 216 MobiDBLite consensus disorder prediction 1 24 - -
Trre7g05569 216 Pfam Late embryogenesis abundant protein 90 197 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05569 Trre-Chr7 61280604 61281254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05569 - - cam:101495352 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00283 9 2009124 2009699 Trre7g05569 7 61280604 61281254 PCT