Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05978 ATGGTGGAAAATATTTTCTCCAAACCAATGTTCTGTTCTGGCATCAACCGTTTCGTTGCTCTGTTTGCAGTTCCTTTACTATCATTCCATTTCATCGTCTCTAACAATCCTTACAAAATGAACCTACGCTTCCTCGCCGCAGACACACTTCAAAAGATCATCGTTTTAATTGCTCTTACTATTTGGACCAACATGAGCAAAAAAGGTTGTTTGGATTGGACAATAACACTCTTCTCTATTTCAACACTCCCAAACACTTTGGTGATGGGAATCCCTCTTTTGAAAGGCATGTACGGTGAATTTTCAGAGAGCTTGATGGTACAAATTGTGGTTCTTCAATGTATAATTTGGTACACATTCATGTTATTCCTGTTTGAATACAGAGGAGCAAAAATGCTCATCTCAAAACAGTTTCCAGACACTACTACTGCTGGTACCATTGTCTCCATCCATGTTGATTCTGATGTCAGGATGAAAAACTGA 483 0.3872 MVENIFSKPMFCSGINRFVALFAVPLLSFHFIVSNNPYKMNLRFLAADTLQKIIVLIALTIWTNMSKKGCLDWTITLFSISTLPNTLVMGIPLLKGMYGEFSESLMVQIVVLQCIIWYTFMLFLFEYRGAKMLISKQFPDTTTAGTIVSIHVDSDVRMKN 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05978 160 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 4 157 - -
Trre7g05978 160 Pfam Membrane transport protein 9 156 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05978 Trre-Chr7 64084492 64084974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05978 9 156 Organic Solute Cotransporters AT1G73590 81.081 6.22e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05978 K13947 - lja:Lj2g3v0661500.1 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05978 7 64084492 64084974 Trre7g05978 7 64084492 64084974 ECH
Trre7g05978 7 64084492 64084974 Trre11g02074 11 23458933 23463089 PCT