Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g02074 ATGATAACTTTAACTGATTTTTACCATGTTATGACAGCAATGGTGCCACTTTATGTTGCTATGATCTTAGCTTATGGTTCTGTAAAATGGTGGAAAATATTCTCACCTGATCAATGTTCAGGAATCAACCGTTTTGTAGCACTATTTGCAGTTCCACTACTTTCATTCCATTTCATAGCATCAAACAATCCATACAAAATGAACCTTAGGTTCTTAGCAGCAGATACACTTCAAAAACTGATAATTTTATCACTACTTGCAATTTGGAGTAATTTTTCCAAAAGGGGTTGTTTAGAATGGACAATAACACTATTTTCACTCTCAACTTTACCAAACACTTTAGTTATGGGTATCCCTTTACTTAAAGGAATGTATGGTGATTTTTCAGGTAGTTTAATGGTACAAATAGTTGTTCTTCAATGTATAATTTGGTATACTTTGATGCTATTTATGTTTGAATTTAGAGGAGCAAGGTTGTTGATTTCAGAACAATTTCCAGACACTGCTGGTTCTATTGTTTCAATTCATGTTGATTCTGATGTTATGTCATTAGATGGTAGAACACCATTAGAAACTGATGCTGAAATTAAACAAGATGGTAAACTTCATGTTACTGTTAGAAAATCAAATGCTTCAAGATCAGATATTTATTCAAGAAGATCACAAGGTCTTTCTTCAAATACACCTAGACCTTCTAATCTTACTAATGCTGAGATTTATTCTCTTCAATCTTCTAGAAATCCTACACCAAGAGGTTCTAGTTTTAATCATACTGATTTTTACTCTATGATGGGTGCTGGTGCTAGAAACTCTAATTTTGGTTCTAATGATGTTGTTAATTATGGTGTTAATTCAAGAGGTGTTACTCCAAGACCTTCTAATTATGAAGAAGATGCTGCTAATAATAATAATGCTAAGAAATTCAAAAATTATCCTGCACCTAATCCAGGAATGTTTTCACCTACTAACAAAAATGTTGTTAAGAAGAGTAATAATAATAATAATGGTCAAACTCAAAGTCAACAGAAACAAGAAGATCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGATGTGTTTGGTGGAAATGAATTTGGTACTCATGATCAGAATCAGAAAGAAGTTAAATTGAATGTATCTCCAGGAAAAGTAGAGGGTCATAGAGAAACTCAAGAGGACTATTTGGAGAAAGATGAATTCAGCTTTGGAAATAGAGGAATGGAAAGGGAAATGAATCAGCTTGAAGGTGAAAAAGTTGGAGATGGAAAATCAAAAGTTATGCCACCTGCTAGTGTTATGACAAGGCTTATATTGATTATGGTTTGGAGAAAACTTATTAGAAATCCAAACACTTACTCAAGCTTAATTGGTCTCACTTGGTCTCTAGTTTCATTTAGGTGGAATATTGAGATGCCTGCCATTATAGCAAAGTCTATTTCCATATTGTCAGATGCAGGCCTTGGCATGGCCATGTTCAGTCTTGGTTTGTTTATGGCTTTGCAACCAAAAATCATAGCATGTGGAAATTCCATAGCAGCTTTTTCTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCACTTGCTGTTGGACTCAAAGGTGTTCTCTTTCATGTTGCAATTGTGCAGGCAGCTCTTCCCCAAGGAATTGTACCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTAAGCACAGGTGTCATTTTTGGAATGTTGATTGCATTGCCCATTACTCTTGTGTACTACATCTTAATGGGGCTATGA 1794 0.3489 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKLIILSLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDGRTPLETDAEIKQDGKLHVTVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGAGARNSNFGSNDVVNYGVNSRGVTPRPSNYEEDAANNNNAKKFKNYPAPNPGMFSPTNKNVVKKSNNNNNGQTQSQQKQEDLHMFVWSSSASPVSDVFGGNEFGTHDQNQKEVKLNVSPGKVEGHRETQEDYLEKDEFSFGNRGMEREMNQLEGEKVGDGKSKVMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNIEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIAAFSMAVRFLTGPAVMAAASLAVGLKGVLFHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILMGL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g02074 597 NCBIfam auxin efflux carrier 1 597 IPR014024 -
Trre11g02074 597 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 596 - -
Trre11g02074 597 MobiDBLite consensus disorder prediction 318 344 - -
Trre11g02074 597 MobiDBLite consensus disorder prediction 212 234 - -
Trre11g02074 597 Pfam Membrane transport protein 9 592 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g02074 Trre-Chr11 23458933 23463089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g02074 1 588 Organic Solute Cotransporters AT1G73590 71.543 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g02074 K13947 - gmx:100499637 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05978 7 64084492 64084974 Trre11g02074 11 23458933 23463089 PCT