Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05787 ATGCAACGTGTTGTTGATAATGTCCTTGCTGTTACTAAAGAGTCGGTGAAGACTTTTACTTATGAATCTTTGAACAATATTGTGAGGTTTATCAATGGATTATCAGCTATTATGTTGGCATTACTACCTGGGAAAGCTAATATACTTGAAGGTATTCAGGGTTGGGAGCTTAGACCAACTTTTCGTGGACCGCGATTTCCACGTTGGATGGAAAATGGTGTGTCCTCTTTCAACCAATATATTCATGAACTTGCTGTGGATTCTGATGTCTCAAGTCTGGAATACTCATCTGGAGAAGAATATGATGATGTGTATGATGATTATCCTGATACTCCCTCATCTACAAGTTCTAGAGCCAGTTTTACTGATTACAGTAGGCATCATATGGATTGGATTCAGTATATCTTACTTTGGATTTTGGTTCCTGTAAAGTTTTTGCTGGGGATTCCATTTTGTCTTTTCCGGTTAGCTTATTCTGCGGTGTCAAAACCGCGCTCCGTCTCTGAAAATCAGCACTCTGGTGAACAATCGCATTTACATGCGAGGGTGCAAAGCCTCAAAGACCAAATTATTCATCGAACTACTGATAGGAGACGAGGGATCATAGAGGATCTTCATTTAGGCATGGAAATATTCATAGAAGCTGTTTTTGATTTTGTTCACAAGGCAGTATATCTTCTTCTTTCCCCATCAGAAGCTTTTGGAAAATTATTTAGGTTGTTTTCATCTCATGAAAGAGGTATTTCATCTCATGAAAGAGGTATTGAAGATGATGATAATGTTGTTGAGAATGCCACCATTTATACAGCTACGCTTGGAGAGAATGACCGAACACCTACAGAGAGGAATACTGATTTCCGACAGTCTTTTAGCACGGATGCTCGGACATGTCAGGATGTCATAACAGAGCTTGGGTATCCATACGAAGCTATTAAAGTGATCACTGCCGATGGATACGTTCTTCTTTTGGAAAGAATACCCAGGCGAGATGCTCGAAAGGCAGTTTATCTTCAGCATGGAGTTTTTGATTCATCAATGGGTTGGGTATCTAACGGTGTTGTTGGGTCTCCAGCTTTTGCAGCCTATGATCAAGGATATGATGTGTTTTTGGGAAATTTTCGCGGTTTGGTTTCTAGAGAACATGTCAACAAGAACATCTCCTCACGCGAATACTGGCGGTATTCCATCAACGAACACGCGACTGAGGATATTCCTGCTATAGTAGAGAAAATCCATCAAGTTAAAACTGCTGAGTTGAAACTTAGTAACCCTGAAATTGAGGAGGATAATAATGATAATCAGCTTTACAAGCTTTGTGCAATTAGCCATAGTTTGGGAGGAGCCACTATGTTGATGTATATCATTACGCGCAGGATAGAAGAGAAGCCACATAGACTTTCTAGATTGATTTTGTTATCACCTGCTGGTTTTCATCACGACTCTAACATCGTTTTTTCTATTGTGGAGCATGTAATATTTTTTCTAGCTCCTGTTTTGTCTCGTATTTTCCCCGCCTTTTATATACCAACCCGATTCTTTCGTATGCTCGTTAACAAGTTAGCTCGGGACTTGCAAAACCTACCTGCTGTGGGAGGTTTGGTTCAAACTTTAGTAGGTTATGTTCTCGGCGGAGACAGCTCAAATTGGGTTGGAGTTTTAGGAACACCACATTACAACATGAATGACATGCCAGGAGTATCTTTTTATGTTGGTCTTCATCTTGCACAGATAAAAAGAACTAGAAGATTTAGAATGTTTGACTATGGAAGTGCATCTGCTAATATGAAAGTATATGGTTCACCTGAGCCTTTGGATATAGGTGAACATTATTGGCTCATTGACATTCCTATTGATTTGGTTGCTGGTCAGAAAGACAAAGTTATAAGACCTTCAATGGTAAAGAGACACTATAAATTGATGAAGGAGGTTGGTGTGGATGTGTCATTTAATGAGTTTGAATATGCTCATTTGGACTTTACTTTCTCTCATCATGAAGAACTTTTGTCATATGTTATGTCACGTTTGTTGCTTGTGAAGACATATCCAAAGAATGAAGTAAATAAAAGGTCTTTAAGATTAAGGAAGAAAGGACAAGTTTCAGCTACAGGGTAA 2112 0.3911 MQRVVDNVLAVTKESVKTFTYESLNNIVRFINGLSAIMLALLPGKANILEGIQGWELRPTFRGPRFPRWMENGVSSFNQYIHELAVDSDVSSLEYSSGEEYDDVYDDYPDTPSSTSSRASFTDYSRHHMDWIQYILLWILVPVKFLLGIPFCLFRLAYSAVSKPRSVSENQHSGEQSHLHARVQSLKDQIIHRTTDRRRGIIEDLHLGMEIFIEAVFDFVHKAVYLLLSPSEAFGKLFRLFSSHERGISSHERGIEDDDNVVENATIYTATLGENDRTPTERNTDFRQSFSTDARTCQDVITELGYPYEAIKVITADGYVLLLERIPRRDARKAVYLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSREYWRYSINEHATEDIPAIVEKIHQVKTAELKLSNPEIEEDNNDNQLYKLCAISHSLGGATMLMYIITRRIEEKPHRLSRLILLSPAGFHHDSNIVFSIVEHVIFFLAPVLSRIFPAFYIPTRFFRMLVNKLARDLQNLPAVGGLVQTLVGYVLGGDSSNWVGVLGTPHYNMNDMPGVSFYVGLHLAQIKRTRRFRMFDYGSASANMKVYGSPEPLDIGEHYWLIDIPIDLVAGQKDKVIRPSMVKRHYKLMKEVGVDVSFNEFEYAHLDFTFSHHEELLSYVMSRLLLVKTYPKNEVNKRSLRLRKKGQVSATG 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05787 703 Gene3D alpha/beta hydrolase 285 676 IPR029058 -
Trre7g05787 703 FunFam Gastric triacylglycerol lipase 286 676 - -
Trre7g05787 703 Pfam Partial alpha/beta-hydrolase lipase region 298 352 IPR006693 GO:0006629
Trre7g05787 703 PANTHER LYSOSOMAL ACID LIPASE-RELATED 231 676 - -
Trre7g05787 703 SUPERFAMILY alpha/beta-Hydrolases 295 670 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05787 Trre-Chr7 62787386 62791000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05787 1 679 Lipid Metabolism Gene Families AT1G18460 67.299 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05787 - - gmx:100779931 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05787 7 62787386 62791000 Trre7g05787 7 62787386 62791000 ECH
Trre7g05787 7 62787386 62791000 Trre3g03978 3 51045734 51051054 PCT