Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03978 ATGATTCAACAATTGGTTGATCATGTCCTTGCTGTCATTAAAGAGTCAGTGAAGGCTATTACTACTGAGTCATTGAACAGTATTATTAGGATAATCAATGGAGTATCAGCACTTTTGTTGGCATTACTTCCTGGAAATGCTAAAATACTTGAAGGTATTCATGGTTGGGAACTCAGACCAACTTTCCGAGGACCACGGCTTCCTCGATGGATGGAGAATGGTGCGTCTTCATTCAACCAATTCATCCACGAACTTTCTGTGGATTCTGATAACTCAAGCCTCGAATACTCATCATCCGGAGAAGAAGATAGTGATAGATGTGAATGCCCTCCATCTCCCGCATCTTATAGTTCTAGAGCCTCCGAAGCCGCCTATACTAAATTCAATAGGCATCAGATGAGTTGGATCCAATATATCTTACTTTGGATTTTACTTCCTGTAAAATTTATGCTGAAGATTCCGCTTCGTCTTCTCCGGTTATCTTATTTTATGGTGTCAAAAGCCCTACATGTCTCCAGAGAGAAACGGCCTTCACATTTACATGCATATAAGAGGGTGCAAAGCCTCAAGGAACACTTTATCCACCGTGCTACTGATAGGAGACGCGGTGTTGTAGAGGATCTTCATCTCGGCATAGAGATATGTATAGAAGCTGTCTTTGATGTTGTTCACAAGGCAGCGCATCTTATTCTATCTCCGACAAAAGCTTTTGGTGCAATATTCGGGTTGTTTTCATCTCATGAAAGTGGAATTAAAGAAACTCGCAATGCTGTTGAGGATGCATCGGTTTCTACAGCCACGCTAGAGGGGGAAGACCCTGCACCTACAGAGAGGATAACTAACTACGAGTCTCTGAATACAGATGCGCGTACATGTCAGGATGTCATAACAGATCTCGGGTATCCGTATGAAGCTATTAAGGTGATCACGGCTGATGGATATATTATTCTTTTGGAACGAATACCTAGACGAGATGCACGAAAAGCTGTTTTTCTTCAGCATGGAGTTTTTGATTCATCAATGGGTTGGGTATCTAATGGTGTTGTTGGATCTCCAGCTTTTGCAGCCTATGATCAAGGGTATGATGTATATCTTGGGAACTTTCGTGGTTTGGTTTCTAGGGAACATGTCAACAAAAACATATCATCACGGCAATACTGGAAGTACTCCGTCAATGAGCACGGGACGGAGGATATTCCTGCTATGATAGAGAAAATCCATCAAGTGAAAACCGCTGAATTGAAGCTTAGTACACCTAATATTGAGGACGAAATCGATGATGATCAGCCTTACAAGCTTTGTGCAATTTCTCATAGTTTGGGAGGAGCTGCAATGATAATGTATATTGTTACGCGAAGGATAGAAGAGAAGCCACATAGACTTTCAAGATTGGTTTTATTATCTCCGGCCGGTTTTCATGACGACTCTAACATAGTTTTTTCCGCGGCAGAGATTCTATTATCTATTATGGCTCCTATTTTGTCTCAAGTTGTTCCTGCATTCTATATACCTACCAGATTTTTTCGCATGCTTGTCTTTAAGTTAGCTCGGGATCTTCATAACCTACCTGCAGTTGGAGGACTTGTTCAAACCCTAATGAGCTATGTTGTTGGCGGAGACAGTTCAAATTGGGTTGGAGTTTTAGGGCTGCCACACTACAACATGAACGACATGCCAGGAGTATCTTTTCGTGTTGCTCTCCATCTTGCACAGATTAAGCGTGTAGGAAGGTTTAGAATGTTCGATTATGGGAGTGCCTCCGCCAATAGAAAGGTGTACGGTTCACCTGAGCCTTTGGACTTAGGTACACACTATGGACTCATTGACATTCCGGTTGATCTCGTTGCTGGACATAAGGACAAAGTTATAAGACCTTCAATGGTGAAAAGACACTATAGATTGATGAAAAATGCCGGTGTAAATGTTTCGTATAATCAATTTGAATATGCTCATTTGGACTTCACGTTCTCACATCGCGAAGAACTCTTGTCATATGTTATGTCACGCTTATTGCTCGTTGATCCGAACTCAAAGCAACAAGTGAATCAAAGGGTTGCAAAATCGGAGAGAAACGAAGAAGGTGAAGCTAGCAAGTAG 2097 0.4177 MIQQLVDHVLAVIKESVKAITTESLNSIIRIINGVSALLLALLPGNAKILEGIHGWELRPTFRGPRLPRWMENGASSFNQFIHELSVDSDNSSLEYSSSGEEDSDRCECPPSPASYSSRASEAAYTKFNRHQMSWIQYILLWILLPVKFMLKIPLRLLRLSYFMVSKALHVSREKRPSHLHAYKRVQSLKEHFIHRATDRRRGVVEDLHLGIEICIEAVFDVVHKAAHLILSPTKAFGAIFGLFSSHESGIKETRNAVEDASVSTATLEGEDPAPTERITNYESLNTDARTCQDVITDLGYPYEAIKVITADGYIILLERIPRRDARKAVFLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVYLGNFRGLVSREHVNKNISSRQYWKYSVNEHGTEDIPAMIEKIHQVKTAELKLSTPNIEDEIDDDQPYKLCAISHSLGGAAMIMYIVTRRIEEKPHRLSRLVLLSPAGFHDDSNIVFSAAEILLSIMAPILSQVVPAFYIPTRFFRMLVFKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLAQIKRVGRFRMFDYGSASANRKVYGSPEPLDLGTHYGLIDIPVDLVAGHKDKVIRPSMVKRHYRLMKNAGVNVSYNQFEYAHLDFTFSHREELLSYVMSRLLLVDPNSKQQVNQRVAKSERNEEGEASK 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03978 698 Pfam Partial alpha/beta-hydrolase lipase region 293 347 IPR006693 GO:0006629
Trre3g03978 698 FunFam Gastric triacylglycerol lipase 281 671 - -
Trre3g03978 698 PANTHER LYSOSOMAL ACID LIPASE-RELATED 145 671 - -
Trre3g03978 698 MobiDBLite consensus disorder prediction 92 117 - -
Trre3g03978 698 Gene3D alpha/beta hydrolase 281 671 IPR029058 -
Trre3g03978 698 SUPERFAMILY alpha/beta-Hydrolases 290 667 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03978 Trre-Chr3 51045734 51051054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03978 2 682 Lipid Metabolism Gene Families AT1G18460 66.423 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03978 - - gmx:100785917 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03978 3 51045734 51051054 Trre3g03978 3 51045734 51051054 ECH
Trre7g05787 7 62787386 62791000 Trre3g03978 3 51045734 51051054 PCT