Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05570 ATGGCCAATGCAGACAGACATGCTGGGAATATTTTGATTAGAAAGGAGGCAGGTGGCCAAATTAAGCTCATTCCCATTGATCATGGCTATTGTCTACCAGATAAATTTGAAGATTGCACGTTTGATTGGCTTTACTGGCCGCAAACACGTCAGCCGTACTCACGCGAGACAGTTGATTATATCAATTCTTTGGATGCTGAAAAAGACATTGAACTTTTGAAACTTTATGGATGGGATATTCCACTTCAGTGTGCGCGAACACTTCGCATTTCCACAATGCTGCTGAAGAAAGGGGTTGCAAGAGGTCTTACTCCGTATGCAATTGGAAGCATCATGTGTCGGGAAAATTTGAACAAGGAATCTGTAATTGAGGAAATTATAAGTGAAGCTCAAGATTCCTTGGGTCCTGGCGTGGGCGAATCGGCGTTTCTTGATTCCATCTCCCAAATCATGGATTGCCATCTTGATAAGCTCGCAATATAG 483 0.4286 MANADRHAGNILIRKEAGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQTRQPYSRETVDYINSLDAEKDIELLKLYGWDIPLQCARTLRISTMLLKKGVARGLTPYAIGSIMCRENLNKESVIEEIISEAQDSLGPGVGESAFLDSISQIMDCHLDKLAI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05570 160 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1 142 IPR000403 -
Trre7g05570 160 SUPERFAMILY Protein kinase-like (PK-like) 3 158 IPR011009 -
Trre7g05570 160 Pfam Phosphatidylinositol 3- and 4-kinase 1 107 IPR000403 -
Trre7g05570 160 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 133 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05570 Trre-Chr7 61287802 61288555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05570 1 159 Acyl Lipid Metabolism Gene Families AT5G24240 62.500 9.97e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05570 - - gmx:100809172 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00282 9 2005477 2007575 Trre7g05570 7 61287802 61288555 PCT