Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05479 ATGGCAGCAGCGACGACAACAACAACTAAAACAACATCAAATTTCCTCAAACCCCCAAATCATCCTAATAATAATAACCAACCCATCATCACCAAACCTAAACGACGCAAATGTCGTGAAACGACAATCTCCACCTCCGTTTCGACCAGAATCCAACAATCCGAACCCGACTCTCAATTACCCGATTCACCTTCCCCTAATTACACCGTTCGTTACTCTCCCGGTACATTTTCCCCAATCATGGATCATTTCACACATTCTTCTTCCCCAATTTCGGGTCAGGACCCGTTTCCTTCAAGCTTCACCAAATTCAATTCCGCACTCACCGCCGGTCTTCTTAACCCAATGTCACCTCCGCCGGACAAAACCCGATCCAGTCCAACACTCTTCGAAATGATGGTTAACGAACCCGATATTCATCATAGAACAAATCAGATCCCAAACAACATTGCTACTACTTCTTCGTCGATTCAGAAACCACAAATTGTAGTACAAGATCGTGAAACCCTAATGATGCATCGAATTTCTGAATTGTTATCAGCTTCTCGTAGTCCTGGTAATCACTTCAATGATTCATCTTCCAGTGATATTAAGCTTACACTAAGTTCTAAAGATGGATTCAGTGTTTCTATGAATGTTCATCGTCAGATTCTTGTTGCACATAGTAGATTCTTCTCCGTCAAGCTTTCTGATAGGTGGACACAGCAACAGCAACGAACGGCGTTGCCTTATCTTGTTGAAATTGCTGATTGTGATGATGTTGAGGTTTATGTCGAGACTTTGAGGTTGATGTATTGTAAGGATCTTCGGAAGAAGCTAATGAAAGAGGATGTTTCCAAAGTCTTGGGTATCTTAAAGGTTTCGGCTGCAATTGGATTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCGCCATGGGCGGAAGATGAAGAAGACAAGGTGGCATCGCTCCTGTCTGAACTTCGTCTTGAATCTGTTGGAGCTGTGGAGGTTTTGAAGAGGGTTTCTACTGATGTTGTCAATGGAAATGAAGAGGGGAATGATAATGAAGAAGTCTTGCTTAAACTTATTCGTGTGGTTCTTGAAGGCAAAGATGAAAAGGCCAGGCGAGAGATGAAAGGCTTGGTGTCGAAGATGCTCCATGAAAATTCTTCTCAGAATGATCTTCGAAAGGAGTCATTATACTCGGCATGTGATGATTGTATGCAGTTGCTTCGTCACCACTTTTTGCGGGCTGCAGATTCGGATCTACAGGATGTGAGTCAAATTGCACGACAAGCTGATAATTTGTATTGGATTTTGGATATTTTGATTGATAGACAGATTGCCGAAGATTTCCTAAAAGCATGGGCCTCCGAATCAGAATTATCTGAAGCCCATTCTAAGGTGCCTGCTGTTCATAGGTTCGAGGTTAGCAGAGTTACTGCCAGGTTGTTTGTTGGGATTGGGAAGGGACAGTTGCTGGCTTCTAAAGATGCTAGGTGTTTACTTCTAAAAACATGGCTTGTGCCATTTTATGATGATTTTGGTTGGATGAGGAGAGCATCCAAGGGCCTTGATAGGCATCTAATCGAGGATGGACTTAGTAACACAATTCTAACTCTGCCACTCTCCTGGCAACAGGAAATTTTGCTTGCTTGGTTTAATCGTTTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGACGAGCTTTCTGGAAGAGGAACGGAGAGCAAGACCGGACAAGACAATTACGAATTACATCTGCATCAATTGAGCACACTTGA 1800 0.4283 MAAATTTTTKTTSNFLKPPNHPNNNNQPIITKPKRRKCRETTISTSVSTRIQQSEPDSQLPDSPSPNYTVRYSPGTFSPIMDHFTHSSSPISGQDPFPSSFTKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMVNEPDIHHRTNQIPNNIATTSSSIQKPQIVVQDRETLMMHRISELLSASRSPGNHFNDSSSSDIKLTLSSKDGFSVSMNVHRQILVAHSRFFSVKLSDRWTQQQQRTALPYLVEIADCDDVEVYVETLRLMYCKDLRKKLMKEDVSKVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEDKVASLLSELRLESVGAVEVLKRVSTDVVNGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENSSQNDLRKESLYSACDDCMQLLRHHFLRAADSDLQDVSQIARQADNLYWILDILIDRQIAEDFLKAWASESELSEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDARCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQDRTRQLRITSASIEHT 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05479 599 MobiDBLite consensus disorder prediction 1 69 - -
Trre7g05479 599 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 174 584 IPR038920 -
Trre7g05479 599 ProSiteProfiles BTB domain profile. 195 273 IPR000210 GO:0005515
Trre7g05479 599 MobiDBLite consensus disorder prediction 1 31 - -
Trre7g05479 599 MobiDBLite consensus disorder prediction 42 69 - -
Trre7g05479 599 Gene3D Potassium Channel Kv1.1; Chain A 164 307 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05479 Trre-Chr7 60558562 60560709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05479 - - ccaj:109800730 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05479 7 60558562 60560709 Trre7g05479 7 60558562 60560709 ECH
Trre7g05479 7 60558562 60560709 Trre5g04315 5 45292699 45295186 PCT