Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04315 ATGGATTCTTCTTCTTCTTCTTCTTCTTATCATCGACGCCGACACCGAACATGGTGTTGCTCTTTCGCAGTTCCACCTTCAAGCCCAGATAACCCACCTATCAAACCTCGAAAGCCCAAACCCCAAGCCCAATCAAAGCCCACCAATCTCTCTTCCTCCTCTTCCATCCCTAACTCCCCTCAAAGTTCCAAATCCAATTCTCGCATTCCCTCTCGTATCGACCCTCGCCGGATCTTATCCCCCGGTAGAGTCTCCCCAATTGAAGACACTCTTCCCGATCCTTCTCCTCTTCTCGATTCACTACCTCAATTAAGATCTCGAAGCTTCCGTGCACCTATTTCTGCTCCCATTCCACCGCCTCCGATGAACGTCGCCGCCGTCGCCGTCGGTGATGGTTTTGATGTGAGAATGAGTTTGAGAGGGAAAAATGGTGGTTGTATTGTTCTGGAGCTGAATTCGGTTGTTCTTTGTGCTAATTCAGAGGTTTTTGCTGGGTTAATTGCGGATTATAGAAAGGGGAGTAATAGTAGTAATTGTTCGGGTGGTAGTAGTAATAAAATGTGTAGAATTGAAGTTCCTGAAGTTGATAATTTGGGTGTTTTTAGAGAAACTATTGAACTTATGTTTGAAGATGATGTTCCTAAAAAGCTTCTCAATATTGGTGTTTATCGTTCCATTGATGTTTTGGAGGTGTCTGCAGGCATTATGTTCACCAAGGGTGTTTTGTCCTGTTTACAATACCTTGAGGCTGTTCCTTGGACAGAAGAGGAAGAAGAGAAATTAAGAAACCTATTCACAAGATTTAAGTTTGATGATGAAACTACAAGGGATATTTTGGGAAGGCTTTACTTGCACGATTCAGAAGATTCCCAGCCGAATGTAGCCCGACAACTTGTTTGTTCCATTACCACCTGTGTCAATGCCAATGCAAGAAATGAATTGAAATCGCTAGTTAAAGGTCTTCTTTGTAAAAGCTCGGTGTATGAGAAGAACCATCTTGACCTAAGCAAAGACGATCTCTATTCTGTTTGCCATTCGTGTATTGACTCACTGATCAGCCTCTTTGAGGAGACATCCGACACCGTCAATCCTGAAAGGTTGACAAAGAAAGATACGAATAAACCGATGATCGAACGCATCTCAAGACAAGTTGATAACATCAACTGGTTGTTGGAAATCATGATTGATGGACAGATAGCAGAGGATTTTGTAGATATATGGTCTGATCAGCACCAACTTCTTAAAATGCATGATAATGCATCACCTATGGTTAGATATGAACTCAGCAGAGTTTCAGCAATTCTGTTTGTTGCCATGGCTACGAGAAAATTGCAATGCCGGTTGGAAGCTAGATCAGGGCTTCTCCAAGCATGGTTCACGCCTATGTTGTTAGACTTTGGTTGGCTTCAGAGATGCAGGAAAGGGCTGGATATAAAGGTATTGCAAGAAGCTATGGGTCAGACACTTCTTACTTTGCCTCTAAAGCAACAACACACTTTGTTCATGGAATGGTTTCACCACTTCTCAAGACATGGCACTGAATGTCCTAATCTAAGCAAAGCATTCCAAATTTGGTGGCGAAGATCGTTTTTAAGAGGCTCTGAAACTTATGCCATTGAATCAAGGTAA 1629 0.426 MDSSSSSSSYHRRRHRTWCCSFAVPPSSPDNPPIKPRKPKPQAQSKPTNLSSSSSIPNSPQSSKSNSRIPSRIDPRRILSPGRVSPIEDTLPDPSPLLDSLPQLRSRSFRAPISAPIPPPPMNVAAVAVGDGFDVRMSLRGKNGGCIVLELNSVVLCANSEVFAGLIADYRKGSNSSNCSGGSSNKMCRIEVPEVDNLGVFRETIELMFEDDVPKKLLNIGVYRSIDVLEVSAGIMFTKGVLSCLQYLEAVPWTEEEEEKLRNLFTRFKFDDETTRDILGRLYLHDSEDSQPNVARQLVCSITTCVNANARNELKSLVKGLLCKSSVYEKNHLDLSKDDLYSVCHSCIDSLISLFEETSDTVNPERLTKKDTNKPMIERISRQVDNINWLLEIMIDGQIAEDFVDIWSDQHQLLKMHDNASPMVRYELSRVSAILFVAMATRKLQCRLEARSGLLQAWFTPMLLDFGWLQRCRKGLDIKVLQEAMGQTLLTLPLKQQHTLFMEWFHHFSRHGTECPNLSKAFQIWWRRSFLRGSETYAIESR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04315 542 MobiDBLite consensus disorder prediction 1 101 - -
Trre5g04315 542 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 132 533 IPR038920 -
Trre5g04315 542 MobiDBLite consensus disorder prediction 42 69 - -
Trre5g04315 542 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04315 Trre-Chr5 45292699 45295186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04315 - - gmx:100806876 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g04315 5 45292699 45295186 Trre5g04315 5 45292699 45295186 ECH
Trre7g05479 7 60558562 60560709 Trre5g04315 5 45292699 45295186 PCT