Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05346 ATGGCCATGACTCGTGAATCTTGGGCTTTTGTCTTTGGCATAATAGGCAACATCATTTCCTTTGCTGTGTTCCTCTCACCATTGCCAACATTTTACACAATCGTCAAGAAGAAATCTGCTGAAGGATATCAAGCACTTCCTTATGTTGTTGCACTTTTTAGTGCAATGCTTTGGATTTACTATGCATTTGTCAAGAGAGAATCTGCTCTTCTTCTAATCACCATTAACACTTTCGGAATTATTGTTGAATCTGCTTATATCATATGCTTCCTAATTTATGCCACAAAGAAGTCTAGGCTTTCAACCATAAAACTACTTCTCTTGTTGAATGTGTTCGGATTTGGAGCCATGCTTCTATCAACTCTCTATCTCTCAAAGGGAGCAAAACGTCTTGCAATCATAGGATGGATTTGTCTTGTTTTCAACATAAGTGTATTTGCTGCACCACTCTTTGTGCTTAGCAAAGTCATAAGGACGAGGAGTGTCGAATACATGCCATTTTTCTTGTCCTTGTCCTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGTCTTCTCCTCAGGGATTATTATGTTGCTCTACCAAATACACTTGGATTTGTGTTCGGCATAATTCAGATGGTAGTGTATTTGATATATAGAAATGCAAAACCAGTGATACAGACACCAGTGAAGGGTCAAGAATTGAGTGGTAGCCATATAGTTGATGTTGTGAAGATTGGAAATGACCCTAATCGTGGAGGAGGTGCAGTTAGCAAAGTGTGA 765 0.3895 MAMTRESWAFVFGIIGNIISFAVFLSPLPTFYTIVKKKSAEGYQALPYVVALFSAMLWIYYAFVKRESALLLITINTFGIIVESAYIICFLIYATKKSRLSTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFVLSKVIRTRSVEYMPFFLSLSLTINAVMWFFYGLLLRDYYVALPNTLGFVFGIIQMVVYLIYRNAKPVIQTPVKGQELSGSHIVDVVKIGNDPNRGGGAVSKV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05346 254 Gene3D - 129 223 - -
Trre7g05346 254 PANTHER RAG1-ACTIVATING PROTEIN 1 14 217 IPR047664 -
Trre7g05346 254 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Trre7g05346 254 FunFam Bidirectional sugar transporter SWEET 10 99 - -
Trre7g05346 254 Gene3D - 10 99 - -
Trre7g05346 254 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Trre7g05346 254 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05346 Trre-Chr7 59630272 59632485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05346 1 240 Miscellaneous Gene Families AT5G50800 57.261 2.13e-94 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05346 K15382 - gmx:100805676 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05346 7 59630272 59632485 Trre7g05346 7 59630272 59632485 ECH
Trre7g05346 7 59630272 59632485 Trre5g04692 5 48844824 48847258 PCT