Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g04692 ATGACCCTTCACCGTGAATCTTGGGCTTTTGTTTTTGGCCTTCTAGGCAACGTCATCTCTGTTATGGTCTTTCTCGCTCCATTGCCAACATTTTATCAAATCTACAAGAAAAAGTCTACACAAGGTTTTCAGTCGATCCCTTATGTTGTTGCATTGCTTAGTGCAATGCTTTGGATATATTATGCACTTGTCAAAAATGAAGATAGTATCTTTCTCCTCACAATTAATTCATTTGGACTTGTGGTAGAATCCATTTACCTTGCAATCTTCCTAGTTTATGCCTCAAATAATGCAAGGCTTTCAACCATCAAGCTTATTCTCTTGTTCAATGTGTTTGGATTTGGAGCAATGCTTGTTTCATCCCTCTGCTTAACAACAGGACCCAAACGTCTTTCAATTATTGGATGGATTTGTCTGGTTTTCAACATAAGCGTATTTGCTTCCCCTCTCTGCATTATTAGACACGTAATAAAGACCAAAAGTGTGACATACATGCCGCTTAGTTTGTCCTTCTTTTTGAGCTTAAATGCTATCATGTGGTTCTTCTATGGTTTTCTCCTCAAGGACTATTACATTGCTCTCCCAAATACGCTTGGATTTTTATTTGGCATAGTTCAAATGGTGATGTATTTGATTTATAGAAACTCCACCAAAGTGGTACTAAAGGAGCCAACAAAGTTACATGAACAAAATGGTCATATTAATATTGATGTTGTGAAGATCATTGACACAGTTATGCTTTCCAATCCGAATCAAGTGGACAATAGTGTTCCTCTGCCTCTGCCTCTGCCTGTATCAACTATTTGTGAGGATACAAATATGATGGAAAATAAATAA 837 0.3716 MTLHRESWAFVFGLLGNVISVMVFLAPLPTFYQIYKKKSTQGFQSIPYVVALLSAMLWIYYALVKNEDSIFLLTINSFGLVVESIYLAIFLVYASNNARLSTIKLILLFNVFGFGAMLVSSLCLTTGPKRLSIIGWICLVFNISVFASPLCIIRHVIKTKSVTYMPLSLSFFLSLNAIMWFFYGFLLKDYYIALPNTLGFLFGIVQMVMYLIYRNSTKVVLKEPTKLHEQNGHINIDVVKIIDTVMLSNPNQVDNSVPLPLPLPVSTICEDTNMMENK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g04692 278 Gene3D - 11 98 - -
Trre5g04692 278 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016020
Trre5g04692 278 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016020
Trre5g04692 278 PANTHER RAG1-ACTIVATING PROTEIN 1 18 225 IPR047664 -
Trre5g04692 278 FunFam Bidirectional sugar transporter SWEET 130 222 - -
Trre5g04692 278 Gene3D - 129 226 - -
Trre5g04692 278 FunFam Bidirectional sugar transporter SWEET 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g04692 Trre-Chr5 48844824 48847258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g04692 1 258 Miscellaneous Gene Families AT5G50790 50.193 1.58e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g04692 K15382 - gmx:100810962 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05346 7 59630272 59632485 Trre5g04692 5 48844824 48847258 PCT